RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 HSFX1Q9UBD0 423 aa13.75□□□□□ -0.21
MCPH1-202ENST00000519221 WNT16Q9UBV4 365 aa13.75□□□□□ -0.21
MCPH1-202ENST00000519221 ZDHHC9Q9Y397 364 aa13.75□□□□□ -0.21
MCPH1-202ENST00000519221 MRPS23Q9Y3D9 190 aaKnown RBP13.75□□□□□ -0.21
MCPH1-202ENST00000519221 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 KPNA7A9QM74 516 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 MYL1P05976 194 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 AVPR2P30518 371 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 HOXD13P35453 343 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
MCPH1-202ENST00000519221 SMARCB1Q12824 385 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 BECN1Q14457 450 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 CYP4A22Q5TCH4 519 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 NPAS3Q8IXF0 933 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 LRRC52Q8N7C0 313 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 GLIS3Q8NEA6 775 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 ITFG1Q8TB96 612 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 RSAD2Q8WXG1 361 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 HPS3Q969F9 1004 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 ZNF512Q96ME7 567 aaPredicted RBP13.74□□□□□ -0.21
MCPH1-202ENST00000519221 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
MCPH1-202ENST00000519221 HCFC1R1Q9NWW0 138 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 FBXL21Q9UKT6 434 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 ITGA11Q9UKX5 1188 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 NUMBLQ9Y6R0 609 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 DENND4CQ5VZ89 1909 aa13.74□□□□□ -0.21
MCPH1-202ENST00000519221 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 CYB561D2O14569 222 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
MCPH1-202ENST00000519221 AFMP43652 599 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 CLCN5P51795 746 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 EPHA5P54756 1037 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 WNT7BP56706 349 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 BMT2Q1RMZ1 405 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 C1orf127Q8N9H9 656 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 ZSWIM2Q8NEG5 633 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 BORCS6Q96GS4 357 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 MFSD1Q9H3U5 465 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 PCIF1Q9H4Z3 704 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 SLC2A4RGQ9NR83 387 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 HSPBP1Q9NZL4 362 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 SERTAD1Q9UHV2 236 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 HPSEQ9Y251 543 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 YIPF1Q9Y548 306 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 ASB3Q9Y575 518 aa13.73□□□□□ -0.21
MCPH1-202ENST00000519221 ZNF638Q14966 1978 aaKnown RBP13.72□□□□□ -0.21
MCPH1-202ENST00000519221 MIA3Q5JRA6 1907 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 MTMR11A4FU01 709 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 PDGFBP01127 241 aaPredicted RBP13.72□□□□□ -0.21
MCPH1-202ENST00000519221 ITGB3P05106 788 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 TMEM191BP0C7N4 346 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 PFKFB1P16118 471 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 RBP5P82980 135 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 TWF1Q12792 350 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 PSMD2Q13200 908 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 CUL4BQ13620 913 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 SLC5A9Q2M3M2 681 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 PRSS36Q5K4E3 855 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
MCPH1-202ENST00000519221 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 PDZD4Q76G19 769 aaPredicted RBP13.72□□□□□ -0.21
MCPH1-202ENST00000519221 C12orf56Q8IXR9 622 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 TMEM86AQ8N2M4 240 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 C2orf15Q8WU43 125 aaKnown RBP13.72□□□□□ -0.21
MCPH1-202ENST00000519221 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 FGF14Q92915 247 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 ANKRD36BP1Q96IX9 119 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 CORO1BQ9BR76 489 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 IRF2BPLQ9H1B7 796 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 INTS13Q9NVM9 706 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 CEP72Q9P209 647 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 AGAP1Q9UPQ3 857 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 WDFY4Q6ZS81 3184 aa13.72□□□□□ -0.21
MCPH1-202ENST00000519221 A0A1W2PQ27 194 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 A0A1W2PQ64 194 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 A0A1W2PQD8 194 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 TGFB1I1O43294 461 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 NARSO43776 548 aaKnown RBP13.71□□□□□ -0.21
MCPH1-202ENST00000519221 HUS1O60921 280 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 ECI2O75521 394 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 VNN2O95498 520 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 OR4Q2P0C623 313 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 CASP1P29466 404 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 POLR2BP30876 1174 aaKnown RBP13.71□□□□□ -0.21
MCPH1-202ENST00000519221 ALDH1A3P47895 512 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 TUFMP49411 452 aaKnown RBP13.71□□□□□ -0.21
MCPH1-202ENST00000519221 EPHB3P54753 998 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 PTPN5P54829 565 aa13.71□□□□□ -0.21
MCPH1-202ENST00000519221 VCPP55072 806 aaKnown RBP13.71□□□□□ -0.21
MCPH1-202ENST00000519221 DUSP4Q13115 394 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms