RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 STT3AP46977 705 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 VCPP55072 806 aaKnown RBP14.29□□□□□ -0.12
PABPC1-208ENST00000519004 BTKQ06187 659 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 SNAPC2Q13487 334 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 APOFQ13790 326 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 NONOQ15233 471 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■□□ 15.9
PABPC1-208ENST00000519004 ECM1Q16610 540 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 CYP4F22Q6NT55 531 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 SCAIQ8N9R8 606 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
PABPC1-208ENST00000519004 MTMR9Q96QG7 549 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 MRPL1Q9BYD6 325 aaKnown RBP14.29□□□□□ -0.12
PABPC1-208ENST00000519004 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
PABPC1-208ENST00000519004 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 DOLKQ9UPQ8 538 aa14.29□□□□□ -0.12
PABPC1-208ENST00000519004 COL1A1P02452 1464 aaPredicted RBP14.28□□□□□ -0.12
PABPC1-208ENST00000519004 FUOMA2VDF0 154 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 POTEMA6NI47 508 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 ENO1P06733 434 aaKnown RBP14.28□□□□□ -0.12
PABPC1-208ENST00000519004 ATF2P15336 505 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 ARHGAP4P98171 946 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 EVX2Q03828 476 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 KCTD21Q4G0X4 260 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 DCAF17Q5H9S7 520 aaPredicted RBP14.28□□□□□ -0.12
PABPC1-208ENST00000519004 FAM47AQ5JRC9 791 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 NEPROQ6NW34 567 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 PAOXQ6QHF9 649 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 NEK8Q86SG6 692 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 ALYREFQ86V81 257 aaKnown RBP14.28□□□□□ -0.12
PABPC1-208ENST00000519004 ERI1Q8IV48 349 aaKnown RBP14.28□□□□□ -0.12
PABPC1-208ENST00000519004 SYNE4Q8N205 404 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 CASP10Q92851 521 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
PABPC1-208ENST00000519004 NUB1Q9Y5A7 615 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 AK5Q9Y6K8 562 aa14.28□□□□□ -0.12
PABPC1-208ENST00000519004 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.27□□□□□ -0.12
PABPC1-208ENST00000519004 POC1B-GALNT4F8VUJ3 575 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 DENRO43583 198 aaKnown RBP14.27□□□□□ -0.12
PABPC1-208ENST00000519004 OXSR1O95747 527 aaPredicted RBP14.27□□□□□ -0.12
PABPC1-208ENST00000519004 RRM1P23921 792 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 PMLP29590 882 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 ENTPD1P49961 510 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.12
PABPC1-208ENST00000519004 PUM3Q15397 648 aaKnown RBP14.27□□□□□ -0.12
PABPC1-208ENST00000519004 ELMSAN1Q6PJG2 1045 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 KRT25Q7Z3Z0 450 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 SNX29Q8TEQ0 813 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 COX4I2Q96KJ9 171 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 HEPHQ9BQS7 1158 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 MKNK1Q9BUB5 465 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 ZNF696Q9H7X3 374 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 CHST7Q9NS84 486 aa14.27□□□□□ -0.12
PABPC1-208ENST00000519004 BAZ2AQ9UIF9 1905 aaKnown RBP14.27□□□□□ -0.12
PABPC1-208ENST00000519004 CYP26A1O43174 497 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.13
PABPC1-208ENST00000519004 CYP7A1P22680 504 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 CA8P35219 290 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 CYP4A11Q02928 519 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 KRT81Q14533 505 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 LLGL1Q15334 1064 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 DNAL1Q4LDG9 190 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 SMUG1Q53HV7 270 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 SGO2Q562F6 1265 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 ARSHQ5FYA8 562 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 HELBQ8NG08 1087 aaPredicted RBP14.27□□□□□ -0.13
PABPC1-208ENST00000519004 ITPKCQ96DU7 683 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 NEURL2Q9BR09 285 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 TSSK1BQ9BXA7 367 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 MANSC1Q9H8J5 431 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 COQ6Q9Y2Z9 468 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 TSC22D4Q9Y3Q8 395 aa14.27□□□□□ -0.13
PABPC1-208ENST00000519004 CLDN3O15551 220 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 TGDSO95455 350 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 LDHAP00338 332 aaKnown RBP14.26□□□□□ -0.13
PABPC1-208ENST00000519004 TFPTP0C1Z6 253 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 FDFT1P37268 417 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 MAGEA4P43358 317 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 NCKAP1LP55160 1127 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 MYBPC1Q00872 1141 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 MESDQ14696 234 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 USP41Q3LFD5 358 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 ANKDD1AQ495B1 522 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 POTEHQ6S545 545 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 SYDE1Q6ZW31 735 aaPredicted RBP14.26□□□□□ -0.13
PABPC1-208ENST00000519004 ATG4AQ8WYN0 398 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 GCNAQ96QF7 691 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 GPR88Q9GZN0 384 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
PABPC1-208ENST00000519004 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 A0A088AWK7 358 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 MYOCOSA0A1B0GUC4 107 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 GSTTP1A0A1W2PQM5 241 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 CASQ2O14958 399 aaPredicted RBP14.26□□□□□ -0.13
PABPC1-208ENST00000519004 CYTH3O43739 400 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 KRT38O76015 456 aa14.26□□□□□ -0.13
PABPC1-208ENST00000519004 MYL2P10916 166 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms