RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 TEX33O43247 280 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 OAZ2O95190 189 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 UCHL3P15374 230 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 SLC9A1P19634 815 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 PBX1P40424 430 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 CUL2Q13617 745 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 PPP2R2DQ66LE6 453 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 SPECC1LQ69YQ0 1117 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 KIAA1841Q6NSI8 718 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 GPR153Q6NV75 609 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 THEM5Q8N1Q8 247 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 KLHL23Q8NBE8 558 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 C3orf58Q8NDZ4 430 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 ZNF397Q8NF99 534 aaPredicted RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 ANP32BQ92688 251 aaKnown RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 PCMTD1Q96MG8 357 aaPredicted RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 MMS19Q96T76 1030 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 TTPALQ9BTX7 342 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 HERC2P3Q9BVR0 1158 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 STK33Q9BYT3 514 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 NUCKS1Q9H1E3 243 aaKnown RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 GRPEL1Q9HAV7 217 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 UBE2TQ9NPD8 197 aaPredicted RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 NGRNQ9NPE2 291 aaKnown RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLN8-203ENST00000518780 NXF1Q9UBU9 619 aaKnown RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 YBX2Q9Y2T7 364 aaKnown RBP10.15□□□□□ -0.78
CLN8-203ENST00000518780 IRAK3Q9Y616 596 aa10.15□□□□□ -0.78
CLN8-203ENST00000518780 A0A1W2PQJ5 194 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 OR6C75A6NL08 312 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 NT5C1B-RDH14C9J2C7 533 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 RBAK-RBAKDNI3L0D1 243 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 CLSTN1O94985 981 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 TPM1P09493 284 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 CCDC172P0C7W6 258 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 MYOGP15173 224 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 WARSP23381 471 aaKnown RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 PCSK1P29120 753 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 CDC25BP30305 580 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 PBX2P40425 430 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 ASPAP45381 313 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 ZNF75DP51815 510 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 DSG1Q02413 1049 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 YWHAHQ04917 246 aaPredicted RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 SMARCB1Q12824 385 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 MRPL58Q14197 206 aaKnown RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 MAPRE1Q15691 268 aaKnown RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 SOWAHAQ2M3V2 549 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 FAM171A1Q5VUB5 890 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 DPY19L2P1Q6NXN4 242 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 VSTM4Q8IW00 320 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 ADGRF2Q8IZF7 708 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 PPM1KQ8N3J5 372 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 FBXO22Q8NEZ5 403 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 SPPL3Q8TCT6 385 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 PIK3R5Q8WYR1 880 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 FAM84AQ96KN4 292 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 ACBD6Q9BR61 282 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 C17orf80Q9BSJ5 609 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 PI4K2AQ9BTU6 479 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 LSM14BQ9BX40 385 aaKnown RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 GPR62Q9BZJ7 368 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 NKX2-4Q9H2Z4 354 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 SNX25Q9H3E2 840 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 APOBEC3GQ9HC16 384 aaKnown RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 SIX2Q9NPC8 291 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 CEP72Q9P209 647 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 HCSTQ9UBK5 93 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 KIAA1257Q9ULG3 409 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 MAFFQ9ULX9 164 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 BARX2Q9UMQ3 279 aaPredicted RBP10.14□□□□□ -0.79
CLN8-203ENST00000518780 CNTN6Q9UQ52 1028 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 BACE2Q9Y5Z0 518 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 RALGAPA2Q2PPJ7 1873 aa10.14□□□□□ -0.79
CLN8-203ENST00000518780 CITO14578 2027 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 ITGB1P05556 798 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 URODP06132 367 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 CTSAP10619 480 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 GNL1P36915 607 aaPredicted RBP10.13□□□□□ -0.79
CLN8-203ENST00000518780 PBX3P40426 434 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 BRCC3P46736 316 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 GLUD2P49448 558 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 BPIFB4P59827 614 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 LRMPQ12912 555 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 GPM6BQ13491 265 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 PTPROQ16827 1216 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 KIAA0319Q5VV43 1072 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 WSCD1Q658N2 575 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 OVOS1Q6IE37 1185 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 ZNF280DQ6N043 979 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 CACNA2D4Q7Z3S7 1137 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 PPFIBP1Q86W92 1011 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 TMEM173Q86WV6 379 aaPredicted RBP10.13□□□□□ -0.79
CLN8-203ENST00000518780 VPS52Q8N1B4 723 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 PDCL2Q8N4E4 241 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 HASPINQ8TF76 798 aa10.13□□□□□ -0.79
CLN8-203ENST00000518780 BCL7CQ8WUZ0 217 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms