RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 GDF9O60383 454 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 CXCL8P10145 99 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 CTHP32929 405 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 SMTNP53814 917 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 SPAG1Q07617 926 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 GPR17Q13304 367 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 STXBP5Q5T5C0 1151 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 TXNDC11Q6PKC3 985 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 ZPBP2Q6X784 338 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 CEP68Q76N32 757 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 HAUS6Q7Z4H7 955 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 GPIHBP1Q8IV16 184 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 FAM160A2Q8N612 972 aaPredicted RBP17.15■□□□□ 0.34
LMNA-223ENST00000515459 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 DDX1Q92499 740 aaKnown RBP17.15■□□□□ 0.34
LMNA-223ENST00000515459 CHAMP1Q96JM3 812 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 LLPHQ9BRT6 129 aaKnown RBP17.15■□□□□ 0.34
LMNA-223ENST00000515459 CRISPLD1Q9H336 500 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 GTSE1Q9NYZ3 720 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 ASB3Q9Y575 518 aa17.15■□□□□ 0.34
LMNA-223ENST00000515459 KIF26AQ9ULI4 1882 aaPredicted RBP17.15■□□□□ 0.34
LMNA-223ENST00000515459 GREB1Q4ZG55 1949 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 FGF19O95750 216 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 CLTAP09496 248 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 CYP3A5P20815 502 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 GUCY2CP25092 1073 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 HOXA6P31267 233 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 MATR3P43243 847 aaKnown RBP eCLIP17.14■□□□□ 0.33
LMNA-223ENST00000515459 AARSP49588 968 aaKnown RBP eCLIP17.14■□□□□ 0.33
LMNA-223ENST00000515459 MCL1Q07820 350 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 CENPPQ6IPU0 288 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 DSTYKQ6XUX3 929 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 SYNPOQ8N3V7 929 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 TTC8Q8TAM2 541 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 KIF12Q96FN5 646 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 MKNK1Q9BUB5 465 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 ATXN3LQ9H3M9 355 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 OBP2AQ9NY56 170 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 UBQLN1Q9UMX0 589 aaKnown RBP17.14■□□□□ 0.33
LMNA-223ENST00000515459 SLC27A5Q9Y2P5 690 aa17.14■□□□□ 0.33
LMNA-223ENST00000515459 MAP1BP46821 2468 aaKnown RBP17.13■□□□□ 0.33
LMNA-223ENST00000515459 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 LAD1O00515 517 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
LMNA-223ENST00000515459 PLS3P13797 630 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 CDC25AP30304 524 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 PPP2R3AQ06190 1150 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 RAD51AP2Q09MP3 1159 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 CCINQ13939 588 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 MYBPC2Q14324 1141 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 PON2Q15165 354 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 ZBTB6Q15916 424 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 ARHGAP15Q53QZ3 475 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 IL31Q6EBC2 164 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 OVOS1Q6IE37 1185 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 GAREM2Q75VX8 874 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
LMNA-223ENST00000515459 WDR5BQ86VZ2 330 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 TMEM130Q8N3G9 435 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 PSMG2Q969U7 264 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 ZFYVE19Q96K21 471 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 LRRC3BQ96PB8 259 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 C2orf42Q9NWW7 574 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
LMNA-223ENST00000515459 MTMR11A4FU01 709 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
LMNA-223ENST00000515459 TYMPP19971 482 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 KCNA4P22459 653 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 GABRR2P28476 465 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
LMNA-223ENST00000515459 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
LMNA-223ENST00000515459 PLCB2Q00722 1185 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 GPR158Q5T848 1215 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 ITIH5Q86UX2 942 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 ATAD1Q8NBU5 361 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 HAPLN2Q9GZV7 340 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 HSFX1Q9UBD0 423 aa17.12■□□□□ 0.33
LMNA-223ENST00000515459 U2AF2P26368 475 aaKnown RBP eCLIP17.11■□□□□ 0.33
LMNA-223ENST00000515459 PRPHP41219 470 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 LIMK1P53667 647 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 IL17AQ16552 155 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 KYAT1Q16773 422 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 AASDHQ4L235 1098 aaPredicted RBP17.11■□□□□ 0.33
LMNA-223ENST00000515459 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 TTC9BQ8N6N2 239 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 BPIFB1Q8TDL5 484 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 BICD1Q96G01 975 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 TSPAN18Q96SJ8 248 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
LMNA-223ENST00000515459 ANK1P16157 1881 aa17.11■□□□□ 0.33
LMNA-223ENST00000515459 TSC2P49815 1807 aa17.1■□□□□ 0.33
LMNA-223ENST00000515459 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms