RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CYP4X1Q8N118 509 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM20AQ96MK3 541 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 TUBGCP5Q96RT8 1024 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 CCT8L2Q96SF2 557 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 TBCBQ99426 244 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 GMLQ99445 158 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 MRPL9Q9BYD2 267 aaKnown RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM192AQ9GZU8 254 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 XAB2Q9HCS7 855 aaKnown RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 NLRC4Q9NPP4 1024 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 BMP2KQ9NSY1 1161 aaPredicted RBP7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 SNX12Q9UMY4 172 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.15
PDLIM5-219ENST00000514743 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 GOLGA8CPA6NN73 597 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 POM121CA8CG34 1229 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 ARHGAP33O14559 1287 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 TRPA1O75762 1119 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PDE5AO76074 875 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 SPATA31D3P0C874 917 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 LSP1P33241 339 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 SERPINB8P50452 374 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 GUCY2DQ02846 1103 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PDAP1Q13442 181 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 MTMR3Q13615 1198 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 KCTD19Q17RG1 926 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 SIGIRRQ6IA17 410 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 C6orf89Q6UWU4 347 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 SPATA31D4Q6ZUB0 917 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 MYCBPAPQ8TBZ2 947 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 IRGQQ8WZA9 623 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 SYN2Q92777 582 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 GIMAP5Q96F15 307 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 LSM14BQ9BX40 385 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 HERC5Q9UII4 1024 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 TMX2Q9Y320 296 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 COL11A1P12107 1806 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 TCP10L2B9ZVM9 353 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 M0QX08 132 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 HAT1O14929 419 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PRKACAP17612 351 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 CXCR5P32302 372 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 GALK1P51570 392 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 STAT2P52630 851 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 C2orf54Q08AI8 447 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 LSAMPQ13449 338 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 SPA17Q15506 151 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 CNPY1Q3B7I2 92 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 OR52E8Q6IFG1 317 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 LARGE2Q8N3Y3 721 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 COG1Q8WTW3 980 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PTPRN2Q92932 1015 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 HSD17B14Q9BPX1 270 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 EIF2AK1Q9BQI3 630 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM129AQ9BZQ8 928 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 C12orf4Q9NQ89 552 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 EHD2Q9NZN4 543 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PDP2Q9P2J9 529 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 PGAP2Q9UHJ9 254 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 ARID2Q68CP9 1835 aa7.89□□□□□ -1.15
PDLIM5-219ENST00000514743 GOLGA8MH3BSY2 632 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 PPIP5K2O43314 1243 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SERPINB7O75635 380 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 PSMD10O75832 226 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 S100BP04271 92 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 NR2F2P24468 414 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SKOR1P84550 965 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 KLHL30Q0D2K2 578 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 KCNH2Q12809 1159 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 COG2Q14746 738 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TAF1CQ15572 869 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 LVRNQ6Q4G3 990 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 DPH6Q7L8W6 267 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 OTOP1Q7RTM1 612 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 IFNL1Q8IU54 200 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 SPARTQ8N0X7 666 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 DPF3Q92784 378 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 MRRFQ96E11 262 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 IFT43Q96FT9 208 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TTC1Q99614 292 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TUT1Q9H6E5 874 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 DDX56Q9NY93 547 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 HSFX1Q9UBD0 423 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 COMMD3-BMI1R4GMX3 469 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 ZNFX1Q9P2E3 1918 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 CLRN2A0PK11 232 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM170AA1A519 330 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 ATP9AO75110 1047 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 CHRNB1P11230 501 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 CCR3P51677 355 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 AP3M2P53677 418 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 EZH2Q15910 746 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 KNOP1Q1ED39 458 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 RSBN1LQ6PCB5 846 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TUBA3EQ6PEY2 450 aa7.88□□□□□ -1.15
PDLIM5-219ENST00000514743 TBC1D1Q86TI0 1168 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms