RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZMAT2Q96NC0 199 aaKnown RBP15.22■□□□□ 0.03
SPCS3-204ENST00000513139 CNTN3Q9P232 1028 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
SPCS3-204ENST00000513139 ANK1P16157 1881 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 A0A1W2PRU2 124 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 MUTP22033 750 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 RPA1P27694 616 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 WEE1P30291 646 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 CCDC6Q16204 474 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 UNQ6494/PRO21346Q6UXR6 183 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 EFCAB3Q8N7B9 438 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 CEP120Q8N960 986 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 DDX12PQ92771 950 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 TBC1D32Q96NH3 1257 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 ACAP3Q96P50 834 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 ACO2Q99798 780 aaKnown RBP15.21■□□□□ 0.03
SPCS3-204ENST00000513139 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 BACH2Q9BYV9 841 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 CDT1Q9H211 546 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 PTPRHQ9HD43 1115 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 VPS45Q9NRW7 570 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 GTSE1Q9NYZ3 720 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 YIPF1Q9Y548 306 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 ASB3Q9Y575 518 aa15.21■□□□□ 0.03
SPCS3-204ENST00000513139 TMEM8BA6NDV4 472 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 DPYSL4O14531 572 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 EXTL3O43909 919 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 ATG13O75143 517 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 OAZ2O95190 189 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 FGF19O95750 216 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 MCM4P33991 863 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 MPLP40238 635 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 EPHB3P54753 998 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 PTPAQ15257 358 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 ZNF568Q3ZCX4 644 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 RNF43Q68DV7 783 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 PSAPL1Q6NUJ1 521 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 CAMKK1Q8N5S9 505 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 LRRC3BQ96PB8 259 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 MKNK1Q9BUB5 465 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 DNAJC25Q9H1X3 360 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 PDRG1Q9NUG6 133 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
SPCS3-204ENST00000513139 ZMIZ1Q9ULJ6 1067 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 PCNX2A6NKB5 2137 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 ABCA7Q8IZY2 2146 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 MYO16Q9Y6X6 1858 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 THADAQ6YHU6 1953 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 KIAA1549LQ6ZVL6 1849 aa15.2■□□□□ 0.02
SPCS3-204ENST00000513139 PHLPP2Q6ZVD8 1323 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 C1QTNF9BB2RNN3 333 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 M0QZQ0 153 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 WNT7AO00755 349 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 PFKFB2O60825 505 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 EIF5BO60841 1220 aaKnown RBP15.19■□□□□ 0.02
SPCS3-204ENST00000513139 C1QTNF9P0C862 333 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 MCF2P10911 925 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 MARCKSP29966 332 aaPredicted RBP15.19■□□□□ 0.02
SPCS3-204ENST00000513139 HOXC13P31276 330 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 ALDH1A3P47895 512 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 OSTNP61366 133 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 YWHAHQ04917 246 aaPredicted RBP15.19■□□□□ 0.02
SPCS3-204ENST00000513139 ACAP1Q15027 740 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 ITPRIPL2Q3MIP1 535 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 ERMNQ8TAM6 284 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
SPCS3-204ENST00000513139 ZFYVE19Q96K21 471 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 TMEM209Q96SK2 561 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
SPCS3-204ENST00000513139 TMEM134Q9H6X4 195 aa15.19■□□□□ 0.02
SPCS3-204ENST00000513139 ASCC3Q8N3C0 2202 aaKnown RBP15.19■□□□□ 0.02
SPCS3-204ENST00000513139 CTDNEP1O95476 244 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 VNN2O95498 520 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 PROZP22891 400 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 PI4KAP42356 2102 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 GPR17Q13304 367 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 ARHGAP15Q53QZ3 475 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 TMEM196Q5HYL7 178 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 STXBP5Q5T5C0 1151 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 GAREM2Q75VX8 874 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 BPIFB1Q8TDL5 484 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 PSMG2Q969U7 264 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 TMEM60Q9H2L4 133 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 THG1LQ9NWX6 298 aaKnown RBP15.18■□□□□ 0.02
SPCS3-204ENST00000513139 HSFX1Q9UBD0 423 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 SLC8A2Q9UPR5 921 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 WASF3Q9UPY6 502 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
SPCS3-204ENST00000513139 OBSL1O75147 1896 aa15.18■□□□□ 0.02
SPCS3-204ENST00000513139 OR6C75A6NL08 312 aa15.17■□□□□ 0.02
SPCS3-204ENST00000513139 BTBD18B2RXH4 712 aa15.17■□□□□ 0.02
SPCS3-204ENST00000513139 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
SPCS3-204ENST00000513139 PXNP49023 591 aaPredicted RBP15.17■□□□□ 0.02
SPCS3-204ENST00000513139 NOVA1P51513 510 aaKnown RBP15.17■□□□□ 0.02
SPCS3-204ENST00000513139 GRSF1Q12849 480 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPCS3-204ENST00000513139 DUSP4Q13115 394 aa15.17■□□□□ 0.02
SPCS3-204ENST00000513139 PLK5Q496M5 336 aa15.17■□□□□ 0.02
SPCS3-204ENST00000513139 TTC8Q8TAM2 541 aa15.17■□□□□ 0.02
SPCS3-204ENST00000513139 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms