RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 KRT6CP48668 564 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 OR6B2Q6IFH4 312 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 PATL1Q86TB9 770 aaKnown RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TRIM50Q86XT4 487 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 CRLF3Q8IUI8 442 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 PKD2L2Q9NZM6 624 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 ZBTB39O15060 712 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 AKAP3O75969 853 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 RNPC3Q96LT9 517 aaKnown RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 MTMR9Q96QG7 549 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 PACSIN1Q9BY11 444 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 PON1P27169 355 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TKFCQ3LXA3 575 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 AKIRIN2Q53H80 203 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 MOXD1Q6UVY6 613 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 AP3B1O00203 1094 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 SNPHO15079 494 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 DGAT1O75907 488 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 MFN2O95140 757 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 C4BPBP20851 252 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 LRPAP1P30533 357 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 GNA15P30679 374 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 STAT5BP51692 787 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 CDO1Q16878 200 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 ZNF667Q5HYK9 610 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TTC17Q96AE7 1141 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 SPATA33Q96N06 139 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 APOBEC2Q9Y235 224 aaKnown RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 GRID2IPA4D2P6 1211 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 EIF3DO15371 548 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 ATMINO43313 823 aaPredicted RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 LPXNO60711 386 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 GSNP06396 782 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 CLK1P49759 484 aaKnown RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TMPRSS15P98073 1019 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 PRKCEQ02156 737 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 ANO4Q32M45 955 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 ZNF699Q32M78 642 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 EPC2Q52LR7 807 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 RNF149Q8NC42 400 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 PI4K2AQ9BTU6 479 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 IDI2Q9BXS1 227 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
CPNE4-209ENST00000512055 KCND2Q9NZV8 630 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 SUN2Q9UH99 717 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 DCTN4Q9UJW0 460 aa11.38□□□□□ -0.59
CPNE4-209ENST00000512055 TARSL2A2RTX5 802 aaKnown RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 LSM1O15116 133 aaKnown RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 SLC26A4O43511 780 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 STRNO43815 780 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 KCTD21Q4G0X4 260 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 TRIM69Q86WT6 500 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 MICU2Q8IYU8 434 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 CATSPER1Q8NEC5 780 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 NACA2Q9H009 215 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 ITM2BQ9Y287 266 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 PFDN6O15212 129 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 GGPS1O95749 300 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 GNAT1P11488 350 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 CCNI2Q6ZMN8 369 aaPredicted RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 KRT74Q7RTS7 529 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 WDR60Q8WVS4 1066 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 CNGA2Q16280 664 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 Q4G0T1 1027 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 XKR3Q5GH77 459 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 KCTD6Q8NC69 237 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 FAM167AQ96KS9 214 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 MOV10L1Q9BXT6 1211 aaKnown RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 GMNCA6NCL1 334 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 KLRC4O43908 158 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 MTRF1O75570 445 aaKnown RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 HSPA4LO95757 839 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 IFNA8P32881 189 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 YWHAHQ04917 246 aaPredicted RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 NBPF12Q5TAG4 269 aaPredicted RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 C1orf54Q8WWF1 131 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 RPS6KC1Q96S38 1066 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 OSBPL10Q9BXB5 764 aa11.37□□□□□ -0.59
CPNE4-209ENST00000512055 FHDC1Q9C0D6 1143 aaPredicted RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 MAGED2Q9UNF1 606 aaPredicted RBP11.37□□□□□ -0.59
CPNE4-209ENST00000512055 UBE4BO95155 1302 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 EML1O00423 815 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 MED7O43513 233 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 KITP10721 976 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 PSMA2P25787 234 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TRAPPC11Q7Z392 1133 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TMEM35BQ8NCS4 154 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 HAS1Q92839 578 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 CCT7Q99832 543 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
CPNE4-209ENST00000512055 TEX12Q9BXU0 123 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms