RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 DEPTORQ8TB45 409 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 ASB3Q9Y575 518 aa12.68□□□□□ -0.38
RNF4-216ENST00000511859 ZNF638Q14966 1978 aaKnown RBP12.67□□□□□ -0.38
RNF4-216ENST00000511859 CDX4O14627 284 aaPredicted RBP12.67□□□□□ -0.38
RNF4-216ENST00000511859 CPB1P15086 417 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 XBP1P17861 261 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 PSMA5P28066 241 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
RNF4-216ENST00000511859 ALDH1A3P47895 512 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 FBXO43Q4G163 708 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 ARHGAP15Q53QZ3 475 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 ATF7IP2Q5U623 682 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 PIK3AP1Q6ZUJ8 805 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 DDX12PQ92771 950 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 EXOC4Q96A65 974 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 AIFM3Q96NN9 605 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 MKNK1Q9BUB5 465 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
RNF4-216ENST00000511859 ATXN3LQ9H3M9 355 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 SLC32A1Q9H598 525 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
RNF4-216ENST00000511859 USP20Q9Y2K6 914 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 YIPF1Q9Y548 306 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 IGSF10Q6WRI0 2623 aa12.67□□□□□ -0.38
RNF4-216ENST00000511859 A0A087WWV3 80 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 OAZ2O95190 189 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 KCNE1P15382 129 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 LIG1P18858 919 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 DRD1P21728 446 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
RNF4-216ENST00000511859 GRM5P41594 1212 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 TNK2Q07912 1038 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 STXBP5Q5T5C0 1151 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 GAREM2Q75VX8 874 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 SYT13Q7L8C5 426 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 DNAJB7Q7Z6W7 309 aaPredicted RBP12.66□□□□□ -0.38
RNF4-216ENST00000511859 ZNF274Q96GC6 653 aaPredicted RBP12.66□□□□□ -0.38
RNF4-216ENST00000511859 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 NACC1Q96RE7 527 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 DNAJC25Q9H1X3 360 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 ZMYM5Q9UJ78 669 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
RNF4-216ENST00000511859 FAM221BA6H8Z2 402 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 RNF40O75150 1001 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 APBB3O95704 486 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 EDN1P05305 212 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 MCM4P33991 863 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 MCM2P49736 904 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
RNF4-216ENST00000511859 DUSP4Q13115 394 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 RUNX3Q13761 415 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 CALCRLQ16602 461 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 BMP2KLQ5H9B9 411 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 GPR158Q5T848 1215 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 NT5DC1Q5TFE4 455 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 ITIH5Q86UX2 942 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 BSNDQ8WZ55 320 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 PSMG2Q969U7 264 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
RNF4-216ENST00000511859 FAM83CQ9BQN1 747 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 TASP1Q9H6P5 420 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 SNX14Q9Y5W7 946 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 CELSR3Q9NYQ7 3312 aa12.65□□□□□ -0.38
RNF4-216ENST00000511859 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
RNF4-216ENST00000511859 H0Y626 953 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 K7ERI5 159 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 DCLK1O15075 740 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 HYAL3O43820 417 aaPredicted RBP12.64□□□□□ -0.39
RNF4-216ENST00000511859 TRIM16O95361 564 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 SPATA31C1P0DKV0 1188 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 CYP11B2P19099 503 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 GABRR2P28476 465 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 GBP1P32455 592 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 HSPA4P34932 840 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 LMAN2Q12907 356 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 GPR17Q13304 367 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 USP39Q53GS9 565 aaKnown RBP12.64□□□□□ -0.39
RNF4-216ENST00000511859 SOWAHCQ53LP3 525 aaPredicted RBP12.64□□□□□ -0.39
RNF4-216ENST00000511859 PADI6Q6TGC4 694 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 DEFB124Q8NES8 71 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 ACAP3Q96P50 834 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 HHIPQ96QV1 700 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 CNTN3Q9P232 1028 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 HSFX1Q9UBD0 423 aa12.64□□□□□ -0.39
RNF4-216ENST00000511859 OR6C75A6NL08 312 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 M0QZQ0 153 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 VNN2O95498 520 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 EGFP01133 1207 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 TXKP42681 527 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 GALK1P51570 392 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 IRX4P78413 519 aa12.63□□□□□ -0.39
RNF4-216ENST00000511859 UAP1L1Q3KQV9 507 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms