RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 DSEQ9UL01 958 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 AGAP1Q9UPQ3 857 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 FAN1Q9Y2M0 1017 aa9.28□□□□□ -0.92
USP46-207ENST00000508499 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
USP46-207ENST00000508499 SF3B1O75533 1304 aaKnown RBP eCLIP9.27□□□□□ -0.934e-7■■■■■ 133.7
USP46-207ENST00000508499 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 TEX33O43247 280 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 B3GAT3O94766 335 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 KIF4AO95239 1232 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 C1RP00736 705 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 NUDT7P0C024 238 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 UCHL3P15374 230 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 TYMPP19971 482 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 SLC11A1P49279 550 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 ZNF75DP51815 510 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 MYL6P60660 151 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 TRIM14Q14142 442 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 SYCP1Q15431 976 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 ZNF699Q32M78 642 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 ZNF667Q5HYK9 610 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 KLHDC7AQ5VTJ3 777 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 PRPF38BQ5VTL8 546 aaKnown RBP9.27□□□□□ -0.93
USP46-207ENST00000508499 SPECC1LQ69YQ0 1117 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 CREBRFQ8IUR6 639 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 VSTM4Q8IW00 320 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 UBR7Q8N806 425 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 COLGALT1Q8NBJ5 622 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 C3orf58Q8NDZ4 430 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 ZNF558Q96NG5 402 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 NT5C1BQ96P26 610 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 PAAF1Q9BRP4 392 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 TRIM5Q9C035 493 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 NIF3L1Q9GZT8 377 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 INTS2Q9H0H0 1204 aaKnown RBP9.27□□□□□ -0.93
USP46-207ENST00000508499 GOLGA2P5Q9HBQ8 144 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 CHST7Q9NS84 486 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 PCDHB12Q9Y5F1 795 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 CHD9Q3L8U1 2897 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 RANBP2P49792 3224 aaKnown RBP9.27□□□□□ -0.93
USP46-207ENST00000508499 TRANK1O15050 2925 aa9.27□□□□□ -0.93
USP46-207ENST00000508499 MTCL1Q9Y4B5 1905 aaKnown RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 COL4A4P53420 1690 aaPredicted RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 CASTOR2A6NHX0 329 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 RBAK-RBAKDNI3L0D1 243 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 GABRDO14764 452 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 PPEF2O14830 753 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 SPTLC1O15269 473 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 NOL4O94818 638 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 OAZ2O95190 189 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 KRT19P08727 400 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 SLC9A1P19634 815 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 FGFR3P22607 806 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 BMPR1AP36894 532 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 ASPAP45381 313 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 GUCY2FP51841 1108 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 ERVK-21P61565 698 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 YWHAEP62258 255 aaKnown RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 CUL2Q13617 745 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 DSG2Q14126 1118 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 MRPL58Q14197 206 aaKnown RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 WDR72Q3MJ13 1102 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 PHLDB3Q6NSJ2 640 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 PDXDC1Q6P996 788 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 TMCO2Q7Z6W1 182 aaPredicted RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 DDX53Q86TM3 631 aaKnown RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 UNC93AQ86WB7 457 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 PBX4Q9BYU1 374 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 NUCKS1Q9H1E3 243 aaKnown RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 GANQ9H2C0 597 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 APOBEC3GQ9HC16 384 aaKnown RBP9.26□□□□□ -0.93
USP46-207ENST00000508499 SPG21Q9NZD8 308 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 CEP72Q9P209 647 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 LHX6Q9UPM6 363 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 NUB1Q9Y5A7 615 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.26□□□□□ -0.93
USP46-207ENST00000508499 IRAK3Q9Y616 596 aa9.26□□□□□ -0.93
USP46-207ENST00000508499 TK2O00142 265 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 SOD2P04179 222 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 ITGB1P05556 798 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 ODC1P11926 461 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 WARSP23381 471 aaKnown RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 OR1G1P47890 313 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 LHX1P48742 406 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 MFAP3P55082 362 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 JAM2P57087 298 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 TNNC1P63316 161 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 TAP1Q03518 808 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 TBX2Q13207 712 aaPredicted RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 PAN2Q504Q3 1202 aaKnown RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 TIGD5Q53EQ6 642 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 SCARA3Q6AZY7 606 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 FAM109BQ6ICB4 259 aaPredicted RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 PDE12Q6L8Q7 609 aaKnown RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 SHC3Q92529 594 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 SYN2Q92777 582 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms