RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 HES2Q9Y543 173 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 IPPQ9Y573 584 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 PCDHGA1Q9Y5H4 931 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 BACE2Q9Y5Z0 518 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 ATRQ13535 2644 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 CKAP5Q14008 2032 aa3.77□□□□□ -1.81
TCOF1-208ENST00000506063 SCN8AQ9UQD0 1980 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 NEDD4P46934 1319 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 PLXNA2O75051 1894 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 IGHV1OR15-9A0A0B4J2B8 117 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 BHMG1C9JSJ3 638 aaPredicted RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SGK1O00141 431 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CBX4O00257 560 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF213O14771 459 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 KLK10O43240 276 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 AP5Z1O43299 807 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 PARP1P09874 1014 aaKnown RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 IFIT2P09913 472 aaKnown RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 FAM87AP0C7U9 286 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 MYL4P12829 197 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SFPQP23246 707 aaKnown RBP eCLIP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 MAOBP27338 520 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 GJA4P35212 333 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SREBF1P36956 1147 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CD97P48960 835 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 MCM2P49736 904 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ACADVLP49748 655 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 RPL6Q02878 288 aaKnown RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ALX1Q15699 326 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SKIDA1Q1XH10 827 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 HLA-BQ31612 363 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ARL13BQ3SXY8 428 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CCDC157Q569K6 752 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ZMYM1Q5SVZ6 1142 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CYP4A22Q5TCH4 519 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 BROXQ5VW32 411 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SWSAP1Q6NVH7 229 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CEP57Q86XR8 500 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 KSR1Q8IVT5 923 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 DHX40Q8IX18 779 aaKnown RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CACTIN-AS1Q8N1I8 211 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 CCDC33Q8N5R6 958 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ENAHQ8N8S7 591 aaPredicted RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 TRIML1Q8N9V2 468 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 LEMD2Q8NC56 503 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 RFFLQ8WZ73 363 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 DNASE2BQ8WZ79 361 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 KIF1BPQ96EK5 621 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SPACA7Q96KW9 195 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 HSPA12BQ96MM6 686 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 GCOM2Q9BZD3 368 aaPredicted RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 GPR88Q9GZN0 384 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 AGO4Q9HCK5 861 aaKnown RBP3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF302Q9NR11 478 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 PLAAQ9Y263 795 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 WNT6Q9Y6F9 365 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 SLCO1B1Q9Y6L6 691 aa3.76□□□□□ -1.81
TCOF1-208ENST00000506063 ACANP16112 2415 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF106Q9H2Y7 1883 aaKnown RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TACC2O95359 2948 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PHLPP2Q6ZVD8 1323 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 RP1P56715 2156 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PNMA6FA0A0J9YX94 578 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 A0A1W2PNU3 283 aaPredicted RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 A1L4Q6 167 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 CASTOR2A6NHX0 329 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TRIM6-TRIM34B2RNG4 842 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 KLRF2D3W0D1 207 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PTGESO14684 152 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 BACH1O14867 736 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 DHX16O60231 1041 aaKnown RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 DIAPH2O60879 1101 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TADA2AO75478 443 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 STBD1O95210 358 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 CLDN1O95832 211 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 PRKCBP05771 671 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 ZFYP08048 801 aaPredicted RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 ITGA4P13612 1032 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 GABRG2P18507 467 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TKTP29401 623 aaKnown RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 HNF1BP35680 557 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 OPRD1P41143 372 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TWF1Q12792 350 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 GRIK3Q13003 919 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 DNAJC3Q13217 504 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TUSC3Q13454 348 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TESK1Q15569 626 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 FAM160B1Q5W0V3 765 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 LMBRD2Q68DH5 695 aaPredicted RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 XKR5Q6UX68 686 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 CATSPER4Q7RTX7 472 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 TRMT1LQ7Z2T5 733 aaKnown RBP3.75□□□□□ -1.81
TCOF1-208ENST00000506063 HAUS6Q7Z4H7 955 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 ZNF410Q86VK4 478 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 HOMER1Q86YM7 354 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 SIRT2Q8IXJ6 389 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 DCBLD1Q8N8Z6 715 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 IL17RCQ8NAC3 791 aa3.75□□□□□ -1.81
TCOF1-208ENST00000506063 C3orf58Q8NDZ4 430 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms