RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 MAP3K21Q5TCX8 1036 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 LIN9Q5TKA1 542 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 CCSAPQ6IQ19 270 aaPredicted RBP8.59□□□□□ -1.03
COL4A5-208ENST00000505728 CXCL17Q6UXB2 119 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 ALKAL1Q6UXT8 129 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 PHF13Q86YI8 300 aaPredicted RBP8.59□□□□□ -1.03
COL4A5-208ENST00000505728 MCOLN2Q8IZK6 566 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 PDCL2Q8N4E4 241 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 MSANTD4Q8NCY6 345 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 BEST2Q8NFU1 509 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 COG1Q8WTW3 980 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 ZNF653Q96CK0 615 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 HES6Q96HZ4 224 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 PAWRQ96IZ0 340 aaKnown RBP8.59□□□□□ -1.03
COL4A5-208ENST00000505728 CAPZA3Q96KX2 299 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 SNX27Q96L92 541 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 RPS6KC1Q96S38 1066 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 TRIM6Q9C030 488 aaPredicted RBP8.59□□□□□ -1.03
COL4A5-208ENST00000505728 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 ACP6Q9NPH0 428 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 XPNPEP3Q9NQH7 507 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 CHST12Q9NRB3 414 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 SNTG2Q9NY99 539 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 AGAP1Q9UPQ3 857 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 NR2E3Q9Y5X4 410 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 RALGAPA2Q2PPJ7 1873 aa8.59□□□□□ -1.03
COL4A5-208ENST00000505728 SCN1AP35498 2009 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 MIF4GDA9UHW6 222 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 ZNF185O15231 689 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 MED7O43513 233 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 LSM8O95777 96 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CD4P01730 458 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 ITGB3P05106 788 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 ASGR1P07306 291 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 WEE2P0C1S8 567 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 MCM3P25205 808 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CCND3P30281 292 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 POLR2BP30876 1174 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CDH5P33151 784 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 ASPAP45381 313 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 NSFP46459 744 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 NOMO3P69849 1222 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 MYO1EQ12965 1108 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 BRD3Q15059 726 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CLUL1Q15846 466 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 KCNA10Q16322 511 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 WDR72Q3MJ13 1102 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 XKR4Q5GH76 650 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 UBXN11Q5T124 520 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 GDF6Q6KF10 455 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CCDC70Q6NSX1 233 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 RNF180Q86T96 592 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 SERINC5Q86VE9 423 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 RASGEF1CQ8N431 466 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 TMEM35BQ8NCS4 154 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 ACTRT1Q8TDG2 376 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 TMEM40Q8WWA1 233 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CYFIP2Q96F07 1278 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 HPDLQ96IR7 371 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 NUP85Q9BW27 656 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 EIF2AQ9BY44 585 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 PARD6BQ9BYG5 372 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 WNT8AQ9H1J5 351 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CNTN3Q9P232 1028 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CNOT8Q9UFF9 292 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 DDX20Q9UHI6 824 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 LCMT1Q9UIC8 334 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 RAB21Q9UL25 225 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 KIAA1257Q9ULG3 409 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 UBQLN1Q9UMX0 589 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 POLIQ9UNA4 740 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 PIN4Q9Y237 131 aaKnown RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
COL4A5-208ENST00000505728 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 CDY2AQ9Y6F7 541 aa8.58□□□□□ -1.04
COL4A5-208ENST00000505728 TARSL2A2RTX5 802 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 KCNK3O14649 394 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 GPR182O15218 404 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 CALB1P05937 261 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 FAM163BP0C2L3 166 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 KCNE1P15382 129 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 ATF7P17544 494 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 CD58P19256 250 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 CYP3A5P20815 502 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 CXCR5P32302 372 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 SLC1A1P43005 524 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 GLE1Q53GS7 698 aaKnown RBP8.57□□□□□ -1.04
COL4A5-208ENST00000505728 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 FBXO38Q6PIJ6 1188 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 MON1BQ7L1V2 547 aa8.57□□□□□ -1.04
COL4A5-208ENST00000505728 FAM228AQ86W67 206 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms