RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 NELL1Q92832 810 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 PNMA5Q96PV4 448 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 PARVGQ9HBI0 331 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 DLL3Q9NYJ7 618 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 HSFX1Q9UBD0 423 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 SMG5Q9UPR3 1016 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 YIPF1Q9Y548 306 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 F5P12259 2224 aa12.07□□□□□ -0.48
UBE2D3-219ENST00000505207 CITO14578 2027 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 NOTCH4Q99466 2003 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 LACTBL1A8MY62 500 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 CHADO15335 359 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 TRAK2O60296 914 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 TBCAO75347 108 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 PIGRP01833 764 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 VIPR2P41587 438 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 CXCL12P48061 93 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 MCM2P49736 904 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 SPAG1Q07617 926 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 SMARCB1Q12824 385 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 FZD5Q13467 585 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 VEPH1Q14D04 833 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 PTPAQ15257 358 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 TAF12Q16514 161 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 RSPO4Q2I0M5 234 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 TMEM119Q4V9L6 283 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 SPATA1Q5VX52 437 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 SLFN12LQ6IEE8 588 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 THEM5Q8N1Q8 247 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 ZSWIM3Q96MP5 696 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 PGLYRP2Q96PD5 576 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 GCNAQ96QF7 691 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 UPF2Q9HAU5 1272 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 THG1LQ9NWX6 298 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 ZMYM5Q9UJ78 669 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 DERAQ9Y315 318 aa12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-219ENST00000505207 CACNA1AO00555 2505 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 FANCMQ8IYD8 2048 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 A0A0B4J269 797 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 A0A1W2PRU2 124 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 K7ENM7 598 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 MEFVO15553 781 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 MOSPD3O75425 235 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ADRB2P07550 413 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 GJA1P17302 382 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 CCNE1P24864 410 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 CNR2P34972 360 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 LILRA4P59901 499 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 POU5F1Q01860 360 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 TMEM132DQ14C87 1099 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ENOX2Q16206 610 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ARHGAP29Q52LW3 1261 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ARSHQ5FYA8 562 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 DGKKQ5KSL6 1271 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 TSSK4Q6SA08 328 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 DNAJB7Q7Z6W7 309 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 SPEM1Q8N4L4 309 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 SHKBP1Q8TBC3 707 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 PSMG2Q969U7 264 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 SENP8Q96LD8 212 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 KIF2CQ99661 725 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 REEP2Q9BRK0 252 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ATXN3LQ9H3M9 355 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ZHX3Q9H4I2 956 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ASB7Q9H672 318 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 OBP2AQ9NY56 170 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 CDV3Q9UKY7 258 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 USP18Q9UMW8 372 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-219ENST00000505207 GPR179Q6PRD1 2367 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 FOXD2O60548 495 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 LRP3O75074 770 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 GJB2P29033 226 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 WEE1P30291 646 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 CDC25CP30307 473 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 LONP1P36776 959 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 TNFSF9P41273 254 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 ZNF131P52739 623 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 FCHO2Q0JRZ9 810 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 DHX8Q14562 1220 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 POSTNQ15063 836 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 LAIR1Q6GTX8 287 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 RALGPS2Q86X27 583 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 ARID3BQ8IVW6 561 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 C2orf15Q8WU43 125 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-219ENST00000505207 SLC27A5Q9Y2P5 690 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms