RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 EARS2Q5JPH6 523 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 BEST2Q8NFU1 509 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 KIF12Q96FN5 646 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 IFT74Q96LB3 600 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 PGLYRP2Q96PD5 576 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 HHIPQ96QV1 700 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 DNAJC25Q9H1X3 360 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 TUFT1Q9NNX1 390 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 PCDHB8Q9UN66 801 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 ASB3Q9Y575 518 aa17.3■□□□□ 0.36
PDLIM7-210ENST00000503827 ADAMTS20P59510 1910 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 K7ERI5 159 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 RNF40O75150 1001 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 CDC45O75419 566 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 KCNE1P15382 129 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 CYP11B2P19099 503 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 GABRR2P28476 465 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 WEE1P30291 646 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 GBP1P32455 592 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 AMPD2Q01433 879 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 YWHAHQ04917 246 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 DUSP4Q13115 394 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 STK3Q13188 491 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 PADI6Q6TGC4 694 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 AKAP13Q12802 2813 aa17.29■□□□□ 0.36
PDLIM7-210ENST00000503827 ARHGEF35A5YM69 484 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 TRDMT1O14717 391 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 DCLK1O15075 740 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 CDKL5O76039 1030 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 PRAMEF12O95522 483 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 SPATA31C1P0DKV0 1188 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 UAP1L1Q3KQV9 507 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 KIAA1211LQ6NV74 962 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 RUFY3Q7L099 469 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 DNAJB7Q7Z6W7 309 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 CATSPER3Q86XQ3 398 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 PSMG2Q969U7 264 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 C18orf25Q96B23 403 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 ACAP3Q96P50 834 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 CDT1Q9H211 546 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 TASP1Q9H6P5 420 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 GKN1Q9NS71 199 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 GJB4Q9NTQ9 266 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 MSRB2Q9Y3D2 182 aa17.28■□□□□ 0.36
PDLIM7-210ENST00000503827 ABCA7Q8IZY2 2146 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 MYO16Q9Y6X6 1858 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 KIAA1549LQ6ZVL6 1849 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 CDX4O14627 284 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 HYAL3O43820 417 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 NEMFO60524 1076 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 OAZ2O95190 189 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 VNN2O95498 520 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 APBB3O95704 486 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 EGFP01133 1207 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 OR4Q2P0C623 313 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 DRD1P21728 446 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 RUNX3Q13761 415 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 C11orf74Q86VG3 221 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 DEFB124Q8NES8 71 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 EXOC4Q96A65 974 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 CRISPLD1Q9H336 500 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 SLC32A1Q9H598 525 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 POLR3BQ9NW08 1133 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 CNTN3Q9P232 1028 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 EBF1Q9UH73 591 aa17.27■□□□□ 0.36
PDLIM7-210ENST00000503827 KRT2P35908 639 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 DGKEP52429 567 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 GPR17Q13304 367 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 CENPPQ6IPU0 288 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 SYT13Q7L8C5 426 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 USP37Q86T82 979 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 GCNAQ96QF7 691 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 FAM83CQ9BQN1 747 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 ASCC3Q8N3C0 2202 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-210ENST00000503827 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 OR6C75A6NL08 312 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 M0QZQ0 153 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 MED24O75448 989 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 CYP4F8P98187 520 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 NR5A1Q13285 461 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 PMS2CLQ68D20 193 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 CYP2U1Q7Z449 544 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 RPLP0P6Q8NHW5 317 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 KIFAP3Q92845 792 aa17.25■□□□□ 0.35
PDLIM7-210ENST00000503827 ACDQ96AP0 544 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms