RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PSTPIP1O43586 416 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 MTMR1Q13613 665 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 EFTUD2Q15029 972 aaKnown RBP eCLIP18.07■□□□□ 0.481e-7■■■■□ 23.5
HMGXB3-201ENST00000502717 ZNF667Q5HYK9 610 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 LCA5Q86VQ0 697 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 SP8Q8IXZ3 490 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 TRAPPC9Q96Q05 1148 aa18.07■□□□□ 0.48
HMGXB3-201ENST00000502717 F5H6K3 240 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 TM9SF1O15321 606 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 AKAP3O75969 853 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 KRT16P08779 473 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 TAC1P20366 129 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 KLRC3Q07444 240 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 FAM149B1Q96BN6 582 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 CCT7Q99832 543 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 SUGT1Q9Y2Z0 365 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 PEX5P50542 639 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 ZC3H15Q8WU90 426 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 TMEM106CQ9BVX2 250 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 ZNF212Q9UDV6 495 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 DDX3XO00571 662 aaKnown RBP eCLIP18.06■□□□□ 0.481e-22■■■□□ 19
HMGXB3-201ENST00000502717 CCND2P30279 289 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 CASP4P49662 377 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 KRT76Q01546 638 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 CEP55Q53EZ4 464 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 KLC3Q6P597 504 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 ZBTB33Q86T24 672 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 FAM111AQ96PZ2 611 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 CNTNAP4Q9C0A0 1308 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 SYNJ2BP-COX16A0A087WUM0 186 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 ABLIM1O14639 778 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 MYL2P10916 166 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 SKIV2L2P42285 1042 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 NFX1Q12986 1120 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 AUHQ13825 339 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 SNRNP35Q16560 246 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 TMPRSS6Q8IU80 811 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 DCLK2Q8N568 766 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 PURBQ96QR8 312 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 EIF2AQ9BY44 585 aaKnown RBP18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 COX16Q9P0S2 106 aa18.06■□□□□ 0.48
HMGXB3-201ENST00000502717 TMCC1O94876 653 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 SHBGP04278 402 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 SFNP31947 248 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 PRKCIP41743 596 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 CHI3L2Q15782 390 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 IRF2BP1Q8IU81 584 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 JMJD4Q9H9V9 463 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 NUB1Q9Y5A7 615 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 EIF2AK2P19525 551 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 MMP13P45452 471 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 GSCP56915 257 aaPredicted RBP18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 RASA2Q15283 850 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 CCNG2Q16589 344 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 DNAAF5Q86Y56 855 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 TMEM120AQ9BXJ8 343 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 TMEM8AQ9HCN3 771 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 TAGLN3Q9UI15 199 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 LRFN2Q9ULH4 789 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 RPL26L1Q9UNX3 145 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 STARD13Q9Y3M8 1113 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 EPHB6O15197 1021 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 ATP6V1C1P21283 382 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 GIT2Q14161 759 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 APOBEC3FQ8IUX4 373 aaKnown RBP18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 GRID1Q9ULK0 1009 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
HMGXB3-201ENST00000502717 MYCP01106 439 aaPredicted RBP18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 ATP6V1B1P15313 513 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 HDAC4P56524 1084 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 PSMC5P62195 406 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 EXOC8Q8IYI6 725 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 PBXIP1Q96AQ6 731 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 KLHL4Q9C0H6 718 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 INO80B-WBP1J3KQ70 363 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 PIK3R2O00459 728 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 RASSF9O75901 435 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 ESRRBO95718 433 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 PNMA5Q96PV4 448 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 ZNF184Q99676 751 aaPredicted RBP18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 FRMD8Q9BZ67 464 aaPredicted RBP18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 INO80BQ9C086 356 aaPredicted RBP18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 PCMTD2Q9NV79 361 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 SNX5Q9Y5X3 404 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 WFS1O76024 890 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 CDH6P55285 790 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 HEATR6Q6AI08 1181 aaKnown RBP18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 JADE3Q92613 823 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 CLPTM1O96005 669 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 GH2P01242 217 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 NCALDP61601 193 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 ZNF699Q32M78 642 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 TRIM67Q6ZTA4 783 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 CRAMP1Q96RY5 1269 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 ANKRD26Q9UPS8 1709 aa18.04■□□□□ 0.48
HMGXB3-201ENST00000502717 ACCSLQ4AC99 568 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms