RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CTBSQ01459 385 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TNP2Q05952 138 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SPEM2Q0P670 501 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 QPCTQ16769 361 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TBC1D25Q3MII6 688 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 USH1GQ495M9 461 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CYP27C1Q4G0S4 372 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CBWD6Q4V339 395 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CBWD3Q5JTY5 395 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CBWD5Q5RIA9 395 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SNAP47Q5SQN1 464 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZNF322Q6U7Q0 402 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 GPRIN1Q7Z2K8 1008 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SYT9Q86SS6 491 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RASAL3Q86YV0 1011 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 LACC1Q8IV20 430 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 C10orf107Q8IVU9 208 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RTKN2Q8IZC4 609 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 VPS52Q8N1B4 723 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 OR13A1Q8NGR1 328 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ERMNQ8TAM6 284 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZNF417Q8TAU3 575 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SMPDL3BQ92485 455 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 EDAQ92838 391 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ELMOD3Q96FG2 381 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SIPA1Q96FS4 1042 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CLMNQ96JQ2 1002 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZNF396Q96N95 335 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZNF587Q96SQ5 575 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 OSBPL9Q96SU4 736 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FAM129BQ96TA1 746 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 AKTIPQ9H8T0 292 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 KCNK13Q9HB14 408 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC6A14Q9UN76 642 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 C14orf166Q9Y224 244 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRAPPC4Q9Y296 219 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TAF6LQ9Y6J9 622 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CDH10Q9Y6N8 788 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZFHX3Q15911 3703 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 XRN1Q8IZH2 1706 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC12A8A0AV02 714 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FRMD3A2A2Y4 597 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ASAP2O43150 1006 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRAK2O60296 914 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC4A1P02730 911 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 FTLP02792 175 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 KRT1P04264 644 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MMP3P08254 477 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 POU2F2P09086 479 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PPP3CBP16298 524 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NPR2P20594 1047 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CALML3P27482 149 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RFC1P35251 1148 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 ARSEP51690 589 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 GP2P55259 537 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 RPS23P62266 143 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 PPP2R2BQ00005 443 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PRKCEQ02156 737 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CEBPZQ03701 1054 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 GPS1Q13098 491 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 HSP90AA2PQ14568 343 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 RALBP1Q15311 655 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PRAMEF9Q5VWM5 478 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 IGF2-ASQ6U949 168 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 GLB1LQ6UWU2 654 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRIM74Q86UV6 250 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRIM73Q86UV7 250 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 GPR152Q8TDT2 470 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PIH1D2Q8WWB5 315 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 HLA-CQ95604 372 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 NEIL2Q969S2 332 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ZBTB8AQ96BR9 441 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 LENG1Q96BZ8 264 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 ECHDC3Q96DC8 303 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MTMR8Q96EF0 704 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRIM11Q96F44 468 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 ABHD17AQ96GS6 310 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.56□□□□□ -2.16
XRN1-214ENST00000498077 KIF9Q9HAQ2 790 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SYTL2Q9HCH5 934 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 HPS4Q9NQG7 708 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 SLC2A4RGQ9NR83 387 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRNAU1APQ9NX07 287 aaKnown RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 HECAQ9UBI9 543 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 STAP2Q9UGK3 403 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 CDC23Q9UJX2 597 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TPCN1Q9ULQ1 816 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RNF112Q9ULX5 631 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TMEM98Q9Y2Y6 226 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 RIPK3Q9Y572 518 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PCDHB2Q9Y5E7 798 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 PCDHGB6Q9Y5F9 930 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 MAST4O15021 2626 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TROQ12816 1431 aaPredicted RBP1.56□□□□□ -2.16
XRN1-214ENST00000498077 CACNA1BQ00975 2339 aa1.56□□□□□ -2.16
XRN1-214ENST00000498077 TRAV8-6A0A0B4J262 113 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TBKBP1A7MCY6 615 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 GPR89AB7ZAQ6 455 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 H7BYZ3 331 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms