RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CDK16Q00536 496 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 PTK6Q13882 451 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 ZNF568Q3ZCX4 644 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 DUS1LQ6P1R4 473 aaKnown RBP13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 DCLK3Q9C098 648 aa13.78□□□□□ -0.2
GAPVD1-220ENST00000497580 CD58P19256 250 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 PEX2P28328 305 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 FOXR2Q6PJQ5 311 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 ULK2Q8IYT8 1036 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 CCDC89Q8N998 374 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 CATSPER2Q96P56 530 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 FAM111AQ96PZ2 611 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 GCNAQ96QF7 691 aa13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 FAF1Q9UNN5 650 aaPredicted RBP13.77□□□□□ -0.2
GAPVD1-220ENST00000497580 PDE5AO76074 875 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 BMP3P12645 472 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 GRIK5Q16478 980 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 LRRC8BQ6P9F7 803 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 GLIS1Q8NBF1 620 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 NCSTNQ92542 709 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 CCDC97Q96F63 343 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 TUBB6Q9BUF5 446 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 SLC7A8Q9UHI5 535 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 APPL1Q9UKG1 709 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 FRMPD4Q14CM0 1322 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 SPECC1L-ADORA2AF8WAN1 911 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 PI4K2BG5E9Z4 385 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 SNAP25P60880 206 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 CYLC2Q14093 348 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 SBK1Q52WX2 424 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 KLC3Q6P597 504 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 SLC47A2Q86VL8 602 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 OXNAD1Q96HP4 312 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 TTC25Q96NG3 672 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 IL1RAPL1Q9NZN1 696 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 BCL9O00512 1426 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.21
GAPVD1-220ENST00000497580 TGFB1I1O43294 461 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 PABPC4LP0CB38 370 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 RARBP10826 455 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 POLD1P28340 1107 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 SSTR1P30872 391 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 GPS1Q13098 491 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 PDK3Q15120 406 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 KCTD21Q4G0X4 260 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 RABGAP1LQ5R372 815 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 IYDQ6PHW0 289 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 EMSYQ7Z589 1322 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 A8MXQ7 604 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 SORBS3O60504 671 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 GCAP28676 217 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 DLG4P78352 724 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 CAV1Q03135 178 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 FAM182AQ5T1J6 154 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 PAOXQ6QHF9 649 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 ACAD11Q709F0 780 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 NOP9Q86U38 636 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 FHDC1Q9C0D6 1143 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 KLHL4Q9C0H6 718 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 TMOD2Q9NZR1 351 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 PRPF4O43172 522 aaKnown RBP eCLIP13.76□□□□□ -0.219e-6■□□□□ 10.5
GAPVD1-220ENST00000497580 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 ITPK1Q13572 414 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 SH3D19Q5HYK7 790 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 TREML1Q86YW5 311 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 CICQ96RK0 1608 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-220ENST00000497580 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 CCDC166P0CW27 439 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 CDK8P49336 464 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 CCR3P51677 355 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 SYCP2LQ5T4T6 812 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 B3GNT6Q6ZMB0 384 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 GDPD5Q8WTR4 605 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 STK32BQ9NY57 414 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 PSMC3IPQ9P2W1 217 aaPredicted RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 ZBTB39O15060 712 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 TCEA3O75764 348 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 CLPTM1O96005 669 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 VCLP18206 1134 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 RGS2P41220 211 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF554Q86TJ5 538 aa13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 IQCGQ9H095 443 aaKnown RBP13.75□□□□□ -0.21
GAPVD1-220ENST00000497580 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms