RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 XYLT2Q9H1B5 865 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 EPB41L4BQ9H329 900 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 MINDY3Q9H8M7 445 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 VTA1Q9NP79 307 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 IP6K2Q9UHH9 426 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 LCMT1Q9UIC8 334 aa13.86□□□□□ -0.19
GARNL3-220ENST00000496711 GH1P01241 217 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 CXCL8P10145 99 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 HPDP32754 393 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-220ENST00000496711 IGBP1P78318 339 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 CALCOCO2Q13137 446 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 SLMAPQ14BN4 828 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 CDR2LQ86X02 465 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-220ENST00000496711 TMEM35BQ8NCS4 154 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 HERPUD2Q9BSE4 406 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 DCLK3Q9C098 648 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 RNPEPQ9H4A4 650 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 RPF1Q9H9Y2 349 aaKnown RBP13.85□□□□□ -0.19
GARNL3-220ENST00000496711 CHST7Q9NS84 486 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 USTQ9Y2C2 406 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 COL1A2P08123 1366 aa13.85□□□□□ -0.19
GARNL3-220ENST00000496711 O00370 1275 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 GJB6O95452 261 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 GAS8O95995 478 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 RALAP11233 206 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 INSRRP14616 1297 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 POU5F1BQ06416 359 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 KLF1Q13351 362 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 SNX1Q13596 522 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 PTK6Q13882 451 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 FAM187BQ17R55 369 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF792Q3KQV3 632 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 ZNF394Q53GI3 561 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 DNAJC24Q6P3W2 148 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 EXD1Q8NHP7 514 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 BCAS4Q8TDM0 211 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 ATG4AQ8WYN0 398 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 HOMER3Q9NSC5 361 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 WHRNQ9P202 907 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 RSPH14Q9UHP6 348 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 CEP83Q9Y592 693 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 TCRBV5S1A1TA0A578 114 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 MAGEB2O15479 319 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 ZEB2O60315 1214 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 WEE2P0C1S8 567 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 MCF2P10911 925 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 ADORA2AP29274 412 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 GJC1P36383 396 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 MDH1P40925 334 aaKnown RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 SSR1P43307 286 aaKnown RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 GUCY1A3Q02108 690 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 TNFAIP2Q03169 654 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 GJC2Q5T442 439 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 PPTC7Q8NI37 304 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 SLC10A4Q96EP9 437 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 IFT122Q9HBG6 1241 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
GARNL3-220ENST00000496711 ASIC3Q9UHC3 531 aa13.84□□□□□ -0.19
GARNL3-220ENST00000496711 TMEM191CA6NGB0 347 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 KRT19P08727 400 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
GARNL3-220ENST00000496711 LSP1P33241 339 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 RPL7AP62424 266 aaKnown RBP13.83□□□□□ -0.2
GARNL3-220ENST00000496711 TAP1Q03518 808 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 TMEM192Q8IY95 271 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 TFAP2BQ92481 460 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 EMID1Q96A84 441 aaPredicted RBP13.83□□□□□ -0.2
GARNL3-220ENST00000496711 SNF8Q96H20 258 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 CCDC114Q96M63 670 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 MCEEQ96PE7 176 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 BCO2Q9BYV7 579 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 OSBPL8Q9BZF1 889 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 FEZ2Q9UHY8 353 aaPredicted RBP13.83□□□□□ -0.2
GARNL3-220ENST00000496711 POLIQ9UNA4 740 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 NOVA2Q9UNW9 492 aaKnown RBP13.83□□□□□ -0.2
GARNL3-220ENST00000496711 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
GARNL3-220ENST00000496711 ZNF236Q9UL36 1845 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 A0A087WZ62 844 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 RBM47A0AV96 593 aaKnown RBP13.82□□□□□ -0.2
GARNL3-220ENST00000496711 GPR25O00155 361 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 PDHXO00330 501 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 SHBGP04278 402 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 NFICP08651 508 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 RARGP13631 454 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 FGFR4P22455 802 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 CETN2P41208 172 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 PPP2R2AP63151 447 aa13.82□□□□□ -0.2
GARNL3-220ENST00000496711 LACTBP83111 547 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms