RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TSEN2Q8NCE0 465 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 MIPOL1Q8TD10 442 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 ZFPM2Q8WW38 1151 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 KAT5Q92993 513 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 LENG1Q96BZ8 264 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 CARD6Q9BX69 1037 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 STRA6Q9BX79 667 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 MAK16Q9BXY0 300 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 GOLPH3Q9H4A6 298 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 GBA2Q9HCG7 927 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 KMT5AQ9NQR1 393 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 CHORDC1Q9UHD1 332 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 CPA4Q9UI42 421 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 DBR1Q9UK59 544 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 SSX2IPQ9Y2D8 614 aa6.59□□□□□ -1.35
SSBP1-213ENST00000496622 RANBP2P49792 3224 aaKnown RBP6.59□□□□□ -1.35
SSBP1-213ENST00000496622 A0A087X0T9 212 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 A0A1B0GUA9 196 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 LRRIQ4A6NIV6 560 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 BUB1O43683 1085 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 SGTAO43765 313 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 AKR1B10O60218 316 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 AFPP02771 609 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ADRB2P07550 413 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 FAM228BP0C875 321 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 DLATP10515 647 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 TXNP10599 105 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 GAP43P17677 238 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 PSMC2P35998 433 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ADCYAP1R1P41586 468 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 PIK3CAP42336 1068 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 KCNJ6P48051 423 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ACOT2P49753 483 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 STAT5BP51692 787 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 HUNKP57058 714 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 DMP1Q13316 513 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ARHGEF6Q15052 776 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ELF2Q15723 593 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ARHGAP44Q17R89 818 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 CFAP58Q5T655 872 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 SH3PXD2AQ5TCZ1 1133 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 CDCA2Q69YH5 1023 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 FASTKD5Q7L8L6 764 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 LYSMD3Q7Z3D4 306 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 TADA2BQ86TJ2 420 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 DNERQ8NFT8 737 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 LILRB1Q8NHL6 650 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ASAP3Q8TDY4 903 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ATP6V0A1Q93050 837 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 SPATA33Q96N06 139 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 IWS1Q96ST2 819 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 NAA15Q9BXJ9 866 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 POLR3FQ9H1D9 316 aaPredicted RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 RNPEPQ9H4A4 650 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 HAUS4Q9H6D7 363 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 KCND1Q9NSA2 647 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 ZNHIT6Q9NWK9 470 aaKnown RBP6.59□□□□□ -1.36
SSBP1-213ENST00000496622 HSPBP1Q9NZL4 362 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 TBX20Q9UMR3 447 aa6.59□□□□□ -1.36
SSBP1-213ENST00000496622 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PHIPQ8WWQ0 1821 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 DOCK5Q9H7D0 1870 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 HNRNPDLO14979 420 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 POLR3GO15318 223 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 EIF3DO15371 548 aaKnown RBP eCLIP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 LYPLA2O95372 231 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 INHAP05111 366 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SRGAP2CP0DJJ0 459 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 RBP3P10745 1247 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 EDNRBP24530 442 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CSE1LP55060 971 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 MARSP56192 900 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 MRPS25P82663 173 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 TRIM14Q14142 442 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SLMAPQ14BN4 828 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 THEMIS2Q5TEJ8 643 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 FRMD5Q7Z6J6 570 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CTU1Q7Z7A3 348 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 KIAA1328Q86T90 577 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 TMEM151BQ8IW70 566 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 WDR75Q8IWA0 830 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 ZC3H3Q8IXZ2 948 aaKnown RBP6.58□□□□□ -1.36
SSBP1-213ENST00000496622 GSDMBQ8TAX9 411 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SH3TC2Q8TF17 1288 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 UBXN4Q92575 508 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 KAT2BQ92831 832 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CCDC51Q96ER9 411 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SPACA7Q96KW9 195 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 SPAG5Q96R06 1193 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 RUFY1Q96T51 708 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PI4K2AQ9BTU6 479 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 NUP58Q9BVL2 599 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 CAPN6Q9Y6Q1 641 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 MYPNQ86TC9 1320 aa6.58□□□□□ -1.36
SSBP1-213ENST00000496622 PAPPA2Q9BXP8 1791 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms