RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 HDAC4P56524 1084 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 PPP2R5CQ13362 524 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 EDRF1Q3B7T1 1238 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 UBAP2Q5T6F2 1119 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 THOC7Q6I9Y2 204 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 KLHL35Q6PF15 583 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 KLHDC10Q6PID8 442 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 DHRS4L2Q6PKH6 230 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 TRIM67Q6ZTA4 783 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 PATL1Q86TB9 770 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 TRABD2AQ86V40 505 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 CCDC105Q8IYK2 499 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 OGFOD1Q8N543 542 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 SCAIQ8N9R8 606 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 BBOF1Q8ND07 529 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 MRPS26Q9BYN8 205 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 LRRC19Q9H756 370 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 PLGRKTQ9HBL7 147 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 WASF2Q9Y6W5 498 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 hCG_1642624A0A1W2PR95 340 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 MYMKA6NI61 221 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 THAP12O43422 761 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 STK10O94804 968 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 LDHBP07195 334 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 FGRP09769 529 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 VPS41P49754 854 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 NT5C2P49902 561 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 CACNB3P54284 484 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 TBL3Q12788 808 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 INAQ16352 499 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 TMEM266Q2M3C6 531 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 DNAL1Q4LDG9 190 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 ANKRD20A4Q4UJ75 823 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 MFSD4BQ5TF39 518 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 PCNX4Q63HM2 1172 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 PACS1Q6VY07 963 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 KYAT3Q6YP21 454 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 RBM44Q6ZP01 1051 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 OTOAQ7RTW8 1153 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 CCDC25Q86WR0 208 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 FAM186BQ8IYM0 893 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 SNRNP27Q8WVK2 155 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 SCFD1Q8WVM8 642 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 EBF3Q9H4W6 596 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 MYOZ2Q9NPC6 264 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 ARL8BQ9NVJ2 186 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 ARHGEF38Q9NXL2 777 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 PADI4Q9UM07 663 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 HBS1LQ9Y450 684 aaKnown RBP9.57□□□□□ -0.88
HPS4-217ENST00000496385 PSME4Q14997 1843 aa9.57□□□□□ -0.88
HPS4-217ENST00000496385 CLRN2A0PK11 232 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 TBC1D12O60347 775 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 ZBED4O75132 1171 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 SPAG7O75391 227 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 TM7SF2O76062 418 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 CLPTM1O96005 669 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 ATP5BP06576 529 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 VCLP18206 1134 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 CETN2P41208 172 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 HALP42357 657 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 NEK2P51955 445 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 JAM2P57087 298 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 TTC27Q6P3X3 843 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 LRRC8BQ6P9F7 803 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 FRMD5Q7Z6J6 570 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 DZIP1Q86YF9 867 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 CYP4X1Q8N118 509 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 AGBL3Q8NEM8 1001 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 ZNF384Q8TF68 577 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 LARP4BQ92615 738 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 BIRC8Q96P09 236 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 TRIM55Q9BYV6 548 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 KLHL4Q9C0H6 718 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 ARMT1Q9H993 441 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 SCHIP1Q9P0W5 487 aaPredicted RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 ZNF711Q9Y462 761 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 TRMUO75648 421 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 IL1BP01584 269 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 EIF2S1P05198 315 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 ARFIP2P53365 341 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 MECOMQ03112 1051 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 PPIDQ08752 370 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 PDK3Q15120 406 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 MAP1SQ66K74 1059 aaPredicted RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 UGT2A3Q6UWM9 527 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 ERI1Q8IV48 349 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 MARVELD2Q8N4S9 558 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 FAM172AQ8WUF8 416 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 ZNF75CPQ92670 426 aaPredicted RBP9.56□□□□□ -0.88
HPS4-217ENST00000496385 SKA1Q96BD8 255 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 SNF8Q96H20 258 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 DHRS1Q96LJ7 313 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 Q9H521 79 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 SLCO1B3Q9NPD5 702 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 BLOC1S4Q9NUP1 217 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 PCDHA6Q9UN73 950 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 PCDHA8Q9Y5H6 950 aa9.56□□□□□ -0.88
HPS4-217ENST00000496385 GTPBP10A4D1E9 387 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms