RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ITGA11Q9UKX5 1188 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 PCDHGC3Q9UN70 934 aa17.61■□□□□ 0.41
ATG4B-225ENST00000494465 FGGP02679 453 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 MMP8P22894 467 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 CTNNA1P35221 906 aaKnown RBP17.6■□□□□ 0.41
ATG4B-225ENST00000494465 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
ATG4B-225ENST00000494465 TRIM32Q13049 653 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 MMS22LQ6ZRQ5 1243 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 WDTC1Q8N5D0 677 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 UBE2Q2Q8WVN8 375 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 SNX27Q96L92 541 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 UPF3AQ9H1J1 476 aaKnown RBP17.6■□□□□ 0.41
ATG4B-225ENST00000494465 PLEKHA5Q9HAU0 1116 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 AGAP1Q9UPQ3 857 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 HES2Q9Y543 173 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 HTTP42858 3142 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 LSM8O95777 96 aaKnown RBP17.6■□□□□ 0.41
ATG4B-225ENST00000494465 CTNNA2P26232 953 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 CDH5P33151 784 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-225ENST00000494465 RAD23BP54727 409 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 YWHAEP62258 255 aaKnown RBP17.6■□□□□ 0.41
ATG4B-225ENST00000494465 TNNC1P63316 161 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 PRKCZQ05513 592 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 MFSD14CQ5VZR4 134 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 PLEKHA7Q6IQ23 1121 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 AADACL2Q6P093 401 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 UBL4BQ8N7F7 174 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 C7orf31Q8N865 590 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 KIF12Q96FN5 646 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 HPDLQ96IR7 371 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 NR2E1Q9Y466 385 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 PCDHA3Q9Y5H8 950 aa17.6■□□□□ 0.41
ATG4B-225ENST00000494465 KRIT1O00522 736 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 RAD51CO43502 376 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 STAU1O95793 577 aaKnown RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 ALDH1A1P00352 501 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 MAMLD1Q13495 774 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 ZBTB6Q15916 424 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 GNASQ5JWF2 1037 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 PPP1R2P3Q6NXS1 205 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 ALKAL1Q6UXT8 129 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 PAXIP1Q6ZW49 1069 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 KLHL7Q8IXQ5 586 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 TWNKQ96RR1 684 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 NXF3Q9H4D5 531 aaKnown RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 HMGXB4Q9UGU5 601 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 ZSCAN5CA6NGD5 496 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 CCDC188H7C350 402 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 KPNA6O60684 536 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 PGK1P00558 417 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 GNAT1P11488 350 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 TNFRSF8P28908 595 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 AXLP30530 894 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 NKX3-2P78367 333 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 HDXQ7Z353 690 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 APBB1IPQ7Z5R6 666 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 NME8Q8N427 588 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 C1orf131Q8NDD1 294 aaKnown RBP17.59■□□□□ 0.41
ATG4B-225ENST00000494465 GDF3Q9NR23 364 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 DERAQ9Y315 318 aa17.59■□□□□ 0.41
ATG4B-225ENST00000494465 SPOPO43791 374 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 CILPO75339 1184 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 RBP5P82980 135 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 CBX1P83916 185 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 UBXN11Q5T124 520 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 LIN9Q5TKA1 542 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 KRT222Q8N1A0 295 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 SLC4A11Q8NBS3 891 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 AENQ8WTP8 325 aaKnown RBP17.58■□□□□ 0.41
ATG4B-225ENST00000494465 MTG1Q9BT17 334 aaPredicted RBP17.58■□□□□ 0.41
ATG4B-225ENST00000494465 UBXN6Q9BZV1 441 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 ELOVL4Q9GZR5 314 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 DDX47Q9H0S4 455 aaKnown RBP17.58■□□□□ 0.41
ATG4B-225ENST00000494465 CYP3A43Q9HB55 503 aa17.58■□□□□ 0.41
ATG4B-225ENST00000494465 TCRBV5S1A1TA0A578 114 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 CCDC66A2RUB6 948 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 SART1O43290 800 aaKnown RBP17.58■□□□□ 0.4
ATG4B-225ENST00000494465 AOC2O75106 756 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 HEXIM1O94992 359 aaKnown RBP17.58■□□□□ 0.4
ATG4B-225ENST00000494465 PAEPP09466 180 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 CASP8Q14790 479 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 MAP9Q49MG5 647 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 ZNF518BQ9C0D4 1074 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 PLEKHA4Q9H4M7 779 aa17.58■□□□□ 0.4
ATG4B-225ENST00000494465 PIN4Q9Y237 131 aaKnown RBP17.58■□□□□ 0.4
ATG4B-225ENST00000494465 BHMG1C9JSJ3 638 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-225ENST00000494465 SEPT4O43236 478 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 RECQL4O94761 1208 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 PYGMP11217 842 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 CACNB2Q08289 660 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-225ENST00000494465 ORC1Q13415 861 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 CNTN3Q9P232 1028 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 GJB6O95452 261 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 INCA1Q0VD86 236 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 NOGQ13253 232 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 NBPF20Q3BBV1 942 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms