RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 LILRB3O75022 631 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 ODC1P11926 461 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 TCEAL5Q5H9L2 206 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 FBXL13Q8NEE6 735 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 PPM1EQ8WY54 764 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 TSPY26PQ9H489 355 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 APOBEC3GQ9HC16 384 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 GDAP2Q9NXN4 497 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 L1RE1Q9UN81 338 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 VWA8A3KMH1 1905 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 COL6A3P12111 3177 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 ATG2AQ2TAZ0 1938 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 BECN2A8MW95 431 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 SYN3O14994 580 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 ADAM12O43184 909 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 CNPP09543 421 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 ATICP31939 592 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 NRIP1P48552 1158 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 CDR1P51861 262 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 BMS1Q14692 1282 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 PSMD5Q16401 504 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 SOWAHAQ2M3V2 549 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 SGSM1Q2NKQ1 1148 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 MIIPQ5JXC2 388 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 SCARA5Q6ZMJ2 495 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 PDCL2Q8N4E4 241 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 APPL2Q8NEU8 664 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 PIK3R5Q8WYR1 880 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 IGFLR1Q9H665 355 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 RAB20Q9NX57 234 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 LMCD1Q9NZU5 365 aa19.2■□□□□ 0.66
PDLIM7-208ENST00000493815 SMTNL1A8MU46 457 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 PES1O00541 588 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 TEX28O15482 410 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 HUS1O60921 280 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 ASS1P00966 412 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 ZNF18P17022 549 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 POU3F3P20264 500 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 EEF1GP26641 437 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 RBM10P98175 930 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 YWHAHQ04917 246 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 KRT31Q15323 416 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 MAN2A1Q16706 1144 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 OVOS1Q6IE37 1185 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 PDE12Q6L8Q7 609 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 CRACR2AQ9BSW2 395 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 NSUN3Q9H649 340 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 TLE6Q9H808 572 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 IRAK3Q9Y616 596 aa19.19■□□□□ 0.66
PDLIM7-208ENST00000493815 HCRTO43612 131 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 CDK11BP21127 795 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 RAP1GAPP47736 663 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 CDH8P55286 799 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 TNNC1P63316 161 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 NOP14P78316 857 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 LRMPQ12912 555 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 ZNF667Q5HYK9 610 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 ANKS3Q6ZW76 656 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 KLHL5Q96PQ7 755 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 VPS16Q9H269 839 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 SMYD3Q9H7B4 428 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 COQ4Q9Y3A0 265 aa19.18■□□□□ 0.66
PDLIM7-208ENST00000493815 TYMPP19971 482 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 PAX3P23760 479 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 ARPP19P56211 112 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 ZNF445P59923 1031 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 MRPL58Q14197 206 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 CTXN3Q4LDR2 81 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 VWA3BQ502W6 1294 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 ADGRF2Q8IZF7 708 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 RNF214Q8ND24 703 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 FAM200AQ8TCP9 573 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 TATDN2Q93075 761 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 MRPL45Q9BRJ2 306 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 IMPG2Q9BZV3 1241 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 NDST4Q9H3R1 872 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 VRTNQ9H8Y1 702 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 CDY1Q9Y6F8 540 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 SPTBN5Q9NRC6 3674 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 OAZ2O95190 189 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 STAU1O95793 577 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 CYP11A1P05108 521 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 OR4Q2P0C623 313 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 HYAL1Q12794 435 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 OSTM1Q86WC4 334 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 PALB2Q86YC2 1186 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 KBTBD7Q8WVZ9 684 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 TMEM209Q96SK2 561 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 RTP3Q9BQQ7 232 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 EMILIN2Q9BXX0 1053 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 SDCBP2Q9H190 292 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 RXFP1Q9HBX9 757 aa19.17■□□□□ 0.66
PDLIM7-208ENST00000493815 MTRRQ9UBK8 725 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms