RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 INPPL1O15357 1258 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 KRT19P08727 400 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 KCNE1P15382 129 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 GLUD2P49448 558 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 GUCY2FP51841 1108 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 DSC1Q08554 894 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 TUSC3Q13454 348 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 TRPC3Q13507 836 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 CBWD6Q4V339 395 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 XKR4Q5GH76 650 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 CBWD3Q5JTY5 395 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 CBWD5Q5RIA9 395 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 KRT39Q6A163 491 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 SARM1Q6SZW1 724 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 SV2AQ7L0J3 742 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 PPFIBP1Q86W92 1011 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 VN1R2Q8NFZ6 395 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 ZNF516Q92618 1163 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 C18orf25Q96B23 403 aaPredicted RBP14.45□□□□□ -0.1
MSH6-208ENST00000493177 ZMAT2Q96NC0 199 aaKnown RBP14.45□□□□□ -0.1
MSH6-208ENST00000493177 TSPAN18Q96SJ8 248 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 HERC2P3Q9BVR0 1158 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 C1QTNF1Q9BXJ1 281 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
MSH6-208ENST00000493177 SLC38A7Q9NVC3 462 aa14.45□□□□□ -0.1
MSH6-208ENST00000493177 UBQLN1Q9UMX0 589 aaKnown RBP14.45□□□□□ -0.1
MSH6-208ENST00000493177 PTGESO14684 152 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 TEX33O43247 280 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 AP5Z1O43299 807 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 C4BPAP04003 597 aaKnown RBP14.44□□□□□ -0.1
MSH6-208ENST00000493177 HOXB8P17481 243 aaPredicted RBP14.44□□□□□ -0.1
MSH6-208ENST00000493177 PIK3CAP42336 1068 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 CLDN10P78369 228 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 ZP2Q05996 745 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 PTPN14Q15678 1187 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 PTPN21Q16825 1174 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 TDRD10Q5VZ19 366 aaKnown RBP14.44□□□□□ -0.1
MSH6-208ENST00000493177 FUT10Q6P4F1 479 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 ELMSAN1Q6PJG2 1045 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 TMEM184AQ6ZMB5 413 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 TRAPPC11Q7Z392 1133 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 HASPINQ8TF76 798 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 RABGGTAQ92696 567 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 RPGRIP1Q96KN7 1286 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 CRACR2AQ9BSW2 395 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 MARCH5Q9NX47 278 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 DPP3Q9NY33 737 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 TUBGCP4Q9UGJ1 667 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 ADAM28Q9UKQ2 775 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 IRAK3Q9Y616 596 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 PLXNA3P51805 1871 aa14.44□□□□□ -0.1
MSH6-208ENST00000493177 P4HA2O15460 535 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 ITGB3P05106 788 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 ADH1AP07327 375 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 ZNF75DP51815 510 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 MCCD1P59942 119 aaPredicted RBP14.43□□□□□ -0.1
MSH6-208ENST00000493177 NR1I3Q14994 352 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 ZACNQ401N2 412 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 RARS2Q5T160 578 aaKnown RBP14.43□□□□□ -0.1
MSH6-208ENST00000493177 GBP6Q6ZN66 633 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 TMEM130Q8N3G9 435 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 CCDC150Q8NCX0 1101 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 ANP32BQ92688 251 aaKnown RBP14.43□□□□□ -0.1
MSH6-208ENST00000493177 KLHL5Q96PQ7 755 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 PPP1R10Q96QC0 940 aaKnown RBP14.43□□□□□ -0.1
MSH6-208ENST00000493177 VN1R3Q9BXE9 311 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 CD320Q9NPF0 282 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.43□□□□□ -0.19e-11■■■■■ 86.5
MSH6-208ENST00000493177 GCNT4Q9P109 453 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 ANK1P16157 1881 aa14.43□□□□□ -0.1
MSH6-208ENST00000493177 PDCD11Q14690 1871 aaKnown RBP14.43□□□□□ -0.1
MSH6-208ENST00000493177 SF3B1O75533 1304 aaKnown RBP eCLIP14.42□□□□□ -0.1
MSH6-208ENST00000493177 ADCY5O95622 1261 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 HLA-DRAP01903 254 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 ALADP13716 330 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 EPCAMP16422 314 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 CYP3A5P20815 502 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 SP100P23497 879 aaPredicted RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 POLR2BP30876 1174 aaKnown RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 RBP5P82980 135 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 ITIH3Q06033 890 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 NCOA4Q13772 614 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 CBX2Q14781 532 aaPredicted RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 SYCP1Q15431 976 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 ZBTB6Q15916 424 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 EXOC3L4Q17RC7 722 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 USP41Q3LFD5 358 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 CEP57Q86XR8 500 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 GLYCTKQ8IVS8 523 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 C1orf127Q8N9H9 656 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 GSTCDQ8NEC7 633 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 FBXL13Q8NEE6 735 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 TAS1R2Q8TE23 839 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 RIPOR3Q96MK2 946 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 PHF7Q9BWX1 381 aaPredicted RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 LSM14BQ9BX40 385 aaKnown RBP14.42□□□□□ -0.1
MSH6-208ENST00000493177 EPHX3Q9H6B9 360 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 GOLGA2P5Q9HBQ8 144 aa14.42□□□□□ -0.1
MSH6-208ENST00000493177 RAB20Q9NX57 234 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms