RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 HNRNPH2P55795 449 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PDCLQ13371 301 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PRPSAP1Q14558 356 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TAF1CQ15572 869 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF572Q7Z3I7 529 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CDKL3Q8IVW4 592 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ZFYVE28Q9HCC9 887 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 DPP3Q9NY33 737 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ARHGAP28Q9P2N2 729 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 IQANK1A0A1B0GTG1 560 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 GMNCA6NCL1 334 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PAEPP09466 180 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 WEE2P0C1S8 567 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 BRD2P25440 801 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 HSD17B3P37058 310 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 MDH1P40925 334 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CLCN3P51790 818 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TMED2Q15363 201 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 NME8Q8N427 588 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 RNF169Q8NCN4 708 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 LRRC8CQ8TDW0 803 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CYFIP2Q96F07 1278 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ZBED3Q96IU2 234 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TRIM62Q9BVG3 475 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CELF4Q9BZC1 486 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ACTR5Q9H9F9 607 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 RSAD1Q9HA92 442 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 GBA2Q9HCG7 927 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CISHQ9NSE2 258 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 SLC38A7Q9NVC3 462 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ZNF214Q9UL59 606 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CFAP69A5D8W1 941 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CPP00450 1065 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ITGB3P05106 788 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 CYP2C9P11712 490 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 RRM1P23921 792 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 SLCO1A2P46721 670 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 RASSF2P50749 326 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 FKBP1BP68106 108 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ROR1Q01973 937 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 NFX1Q12986 1120 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 GPS1Q13098 491 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 PCBP1Q15365 356 aaKnown RBP eCLIP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 ZACNQ401N2 412 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 SV2CQ496J9 727 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 TEPSINQ96N21 525 aa7.76□□□□□ -1.17
NPHP3-208ENST00000490993 UBQLN1Q9UMX0 589 aaKnown RBP7.76□□□□□ -1.17
NPHP3-208ENST00000490993 SASH3O75995 380 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 INSRRP14616 1297 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 GARSP41250 739 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 MYL6P60660 151 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 TREML2Q5T2D2 321 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 C4orf22Q6V702 233 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 KDM7AQ6ZMT4 941 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 C1orf131Q8NDD1 294 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 APPL2Q8NEU8 664 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ARHGEF26Q96DR7 871 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 PABPC3Q9H361 631 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 SENP1Q9P0U3 644 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 TPX2Q9ULW0 747 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 PIN4Q9Y237 131 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 TNFSF13BQ9Y275 285 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 RASSF10A6NK89 507 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 TNPO2O14787 897 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 EIF3HO15372 352 aaKnown RBP eCLIP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 CYP2C8P10632 490 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 EIF4BP23588 611 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ARSEP51690 589 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 MNAT1P51948 309 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 CCNG2Q16589 344 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 CDO1Q16878 200 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 IQSEC1Q6DN90 963 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 THEM5Q8N1Q8 247 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 MREGQ8N565 214 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ABHD16BQ9H3Z7 469 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 SIX2Q9NPC8 291 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 FZD1Q9UP38 647 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 KPNA6O60684 536 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 PPP1R37O75864 691 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 CELF2O95319 508 aaKnown RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 SRGAP2BP0DMP2 458 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ARL2P36404 184 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 RGS2P41220 211 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 RASGEF1CQ8N431 466 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 RIBC1Q8N443 379 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 ATP11CQ8NB49 1132 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 FAF2Q96CS3 445 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 EPN3Q9H201 632 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 PCSK1NQ9UHG2 260 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 SNX9Q9Y5X1 595 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 COL1A2P08123 1366 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 A0A0G2JLL6 359 aaPredicted RBP7.75□□□□□ -1.17
NPHP3-208ENST00000490993 H3BRB1 525 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 APOL1O14791 398 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 RALAP11233 206 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 GPD1P21695 349 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 AXLP30530 894 aa7.75□□□□□ -1.17
NPHP3-208ENST00000490993 HADHBP55084 474 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms