RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SLC15A3Q8IY34 581 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 RNF10Q8N5U6 811 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 MCPH1Q8NEM0 835 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 DNAJC9Q8WXX5 260 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 FBXL18Q96ME1 805 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 NR1H4Q96RI1 486 aaPredicted RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 GPRC5CQ9NQ84 441 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 SAMD15Q9P1V8 674 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 WDR37Q9Y2I8 494 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 SFI1A8K8P3 1242 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 AOC2O75106 756 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 TBCAO75347 108 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 EDN1P05305 212 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 GSTA1P08263 222 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 ZCCHC18P0CG32 403 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 HOXD11P31277 338 aaPredicted RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 RGS2P41220 211 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 NPTX2P47972 431 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 CCL14Q16627 93 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 MARCH8Q5T0T0 291 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 FRMD5Q7Z6J6 570 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 RETREG2Q8NC44 543 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 AGAP3Q96P47 875 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 SRPK1Q96SB4 655 aaKnown RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 MKNK1Q9BUB5 465 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 OXCT2Q9BYC2 517 aaPredicted RBP10.42□□□□□ -0.74
NOD1-208ENST00000489614 NFKBIZQ9BYH8 718 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 IKZF4Q9H2S9 585 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 ARHGEF38Q9NXL2 777 aa10.42□□□□□ -0.74
NOD1-208ENST00000489614 ABLIM1O14639 778 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 MAGEB3O15480 346 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 GAS2O43903 313 aaKnown RBP10.41□□□□□ -0.74
NOD1-208ENST00000489614 FAM13AO94988 1023 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 C22orf31O95567 290 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 LDHAP00338 332 aaKnown RBP10.41□□□□□ -0.74
NOD1-208ENST00000489614 LGALS2P05162 132 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 GLRA2P23416 452 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 GBP1P32455 592 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 XKR9Q5GH70 373 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 LRRC34Q8IZ02 419 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 ASAP3Q8TDY4 903 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 CAPNS2Q96L46 248 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 SELENOSQ9BQE4 189 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 AGPAT3Q9NRZ7 376 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 PMM2O15305 246 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 FAM189A1O60320 539 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 YY1P25490 414 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 PAFAH1B1P43034 410 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 POU5F1BQ06416 359 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 TSNAXIP1Q2TAA8 658 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 CNPY1Q3B7I2 92 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 SMUG1Q53HV7 270 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 C1orf220Q5T0J3 134 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 MAP3K21Q5TCX8 1036 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
NOD1-208ENST00000489614 EEPD1Q7L9B9 569 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 APBB1IPQ7Z5R6 666 aaPredicted RBP10.41□□□□□ -0.74
NOD1-208ENST00000489614 MYCT1Q8N699 235 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 WDR60Q8WVS4 1066 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 UBLCP1Q8WVY7 318 aaPredicted RBP10.41□□□□□ -0.74
NOD1-208ENST00000489614 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 SMARCAD1Q9H4L7 1026 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 TMEM134Q9H6X4 195 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 PCDH18Q9HCL0 1135 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 TAB2Q9NYJ8 693 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 SEPT9Q9UHD8 586 aaPredicted RBP10.41□□□□□ -0.74
NOD1-208ENST00000489614 SNX12Q9UMY4 172 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 NUB1Q9Y5A7 615 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
NOD1-208ENST00000489614 SRRM3A6NNA2 597 aaPredicted RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 PENKP01210 267 aaPredicted RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 ADSSP30520 456 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 HOXD12P35452 270 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 MLH1P40692 756 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 NAMPTP43490 491 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 MAN2A1Q16706 1144 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 SLC44A4Q53GD3 710 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 GBP7Q8N8V2 638 aaPredicted RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 CEP170P1Q96L14 293 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 TRAPPC9Q96Q05 1148 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 TUBGCP2Q9BSJ2 902 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.4□□□□□ -0.74
NOD1-208ENST00000489614 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 ABT1Q9ULW3 272 aaKnown RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 DAAM1Q9Y4D1 1078 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 A0A1W2PQJ5 194 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 KRT38O76015 456 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 F2P00734 622 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 NR3C1P04150 777 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 UBTFL6P0CB48 400 aaPredicted RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 KCNMA1Q12791 1236 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 DEFB115Q30KQ5 88 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 ODR4Q5SWX8 454 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 GJC2Q5T442 439 aaPredicted RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 ZC3H18Q86VM9 953 aaKnown RBP10.4□□□□□ -0.74
NOD1-208ENST00000489614 FAM178BQ8IXR5 827 aa10.4□□□□□ -0.74
NOD1-208ENST00000489614 CCDC51Q96ER9 411 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms