RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ALG13Q9NP73 1137 aaKnown RBP15.27■□□□□ 0.04
CLDN11-209ENST00000489485 POLIQ9UNA4 740 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 ITIH6Q6UXX5 1313 aa15.27■□□□□ 0.04
CLDN11-209ENST00000489485 NOL4O94818 638 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 PAX3P23760 479 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 AARSP49588 968 aaKnown RBP eCLIP15.27■□□□□ 0.03
CLDN11-209ENST00000489485 ELAVL2Q12926 359 aaKnown RBP15.27■□□□□ 0.03
CLDN11-209ENST00000489485 PHLDB3Q6NSJ2 640 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 GJB7Q6PEY0 223 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 FBXO22Q8NEZ5 403 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 PDLIM2Q96JY6 352 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 SUSD3Q96L08 255 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 B3GALT6Q96L58 329 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 C11orf84Q9BUA3 381 aaPredicted RBP15.27■□□□□ 0.03
CLDN11-209ENST00000489485 GDAP2Q9NXN4 497 aa15.27■□□□□ 0.03
CLDN11-209ENST00000489485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.03
CLDN11-209ENST00000489485 TIMM13Q9Y5L4 95 aaPredicted RBP15.27■□□□□ 0.03
CLDN11-209ENST00000489485 VWA8A3KMH1 1905 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 C5orf67F2Z3F1 127 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 GYPCP04921 128 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 RB1P06400 928 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 ODC1P11926 461 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 KLHDC7AQ5VTJ3 777 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 DPY19L2P1Q6NXN4 242 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 RRAGAQ7L523 313 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 APPL2Q8NEU8 664 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 NIF3L1Q9GZT8 377 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 SIX2Q9NPC8 291 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 PLCB1Q9NQ66 1216 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 APEX2Q9UBZ4 518 aa15.26■□□□□ 0.03
CLDN11-209ENST00000489485 PUF60Q9UHX1 559 aaKnown RBP15.26■□□□□ 0.03
CLDN11-209ENST00000489485 M0QZQ0 153 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 CSPG5O95196 566 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 WEE2P0C1S8 567 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 UCHL3P15374 230 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 CASP14P31944 242 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
CLDN11-209ENST00000489485 SOWAHAQ2M3V2 549 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 KIAA1841Q6NSI8 718 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 TAS1R1Q7RTX1 841 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 DDX53Q86TM3 631 aaKnown RBP15.25■□□□□ 0.03
CLDN11-209ENST00000489485 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 ARHGEF19Q8IW93 802 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 VPS52Q8N1B4 723 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 NUP58Q9BVL2 599 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 VN1R3Q9BXE9 311 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
CLDN11-209ENST00000489485 NLRC4Q9NPP4 1024 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 SZT2Q5T011 3432 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 ARHGEF37A1IGU5 675 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 RNF225M0QZC1 329 aaPredicted RBP15.25■□□□□ 0.03
CLDN11-209ENST00000489485 SOD2P04179 222 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
CLDN11-209ENST00000489485 ASPAP45381 313 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 RAP1GAPP47736 663 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 CDH8P55286 799 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 GOLGA8FQ08AF8 430 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 GOLGA8DPQ0D2H9 430 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
CLDN11-209ENST00000489485 GPM6BQ13491 265 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 USP41Q3LFD5 358 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 WSCD1Q658N2 575 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 CACNA2D4Q7Z3S7 1137 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 TOP6BLQ8N6T0 577 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 ARID3AQ99856 593 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 TTYH3Q9C0H2 523 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 PCDHB8Q9UN66 801 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 FHOD1Q9Y613 1164 aa15.25■□□□□ 0.03
CLDN11-209ENST00000489485 C2CD2LO14523 706 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 SYN3O14994 580 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 CD58P19256 250 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 TBXAS1P24557 533 aaPredicted RBP15.24■□□□□ 0.03
CLDN11-209ENST00000489485 CA8P35219 290 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 FXR1P51114 621 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLDN11-209ENST00000489485 ADKP55263 362 aaKnown RBP15.24■□□□□ 0.03
CLDN11-209ENST00000489485 YWHAHQ04917 246 aaPredicted RBP15.24■□□□□ 0.03
CLDN11-209ENST00000489485 CUL2Q13617 745 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 RAPGEF1Q13905 1077 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
CLDN11-209ENST00000489485 DPH6Q7L8W6 267 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 METTL23Q86XA0 190 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 PDCL2Q8N4E4 241 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 POF1BQ8WVV4 589 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 TTPALQ9BTX7 342 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 GANQ9H2C0 597 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 IMPACTQ9P2X3 320 aa15.24■□□□□ 0.03
CLDN11-209ENST00000489485 AJAP1Q9UKB5 411 aaPredicted RBP15.24■□□□□ 0.03
CLDN11-209ENST00000489485 TRANK1O15050 2925 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 H3BNC9 293 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 FGFR3P22607 806 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 GCNT1Q02742 428 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 ARHGAP44Q17R89 818 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 FIGNQ5HY92 759 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 RTP2Q5QGT7 225 aa15.23■□□□□ 0.03
CLDN11-209ENST00000489485 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms