RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 SLC39A5Q6ZMH5 540 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 SCARA5Q6ZMJ2 495 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 SLFN11Q7Z7L1 901 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 RHOT2Q8IXI1 618 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 CEP112Q8N8E3 955 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 BEST2Q8NFU1 509 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 LPPQ93052 612 aa19.27■□□□□ 0.68
CD40-206ENST00000489304 BRCA2P51587 3418 aa19.26■□□□□ 0.67
CD40-206ENST00000489304 PPEF2O14830 753 aa19.26■□□□□ 0.67
CD40-206ENST00000489304 TADA3O75528 432 aa19.26■□□□□ 0.67
CD40-206ENST00000489304 ZNF606Q8WXB4 792 aa19.26■□□□□ 0.67
CD40-206ENST00000489304 UBQLN1Q9UMX0 589 aaKnown RBP19.26■□□□□ 0.67
CD40-206ENST00000489304 HYOU1Q9Y4L1 999 aa19.26■□□□□ 0.67
CD40-206ENST00000489304 SMIM28A0A1B0GU29 152 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 FAM170AA1A519 330 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 THAP12O43422 761 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 MTA2O94776 668 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 CYP1A2P05177 515 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
CD40-206ENST00000489304 GPNMBQ14956 572 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 ADAM2Q99965 735 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 SDCBP2Q9H190 292 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 OSGEPQ9NPF4 335 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 GTF3C4Q9UKN8 822 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 EFCAB8A8MWE9 144 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 XPOTO43592 962 aaKnown RBP19.25■□□□□ 0.67
CD40-206ENST00000489304 FTCDO95954 541 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 TCP1P17987 556 aaKnown RBP19.25■□□□□ 0.67
CD40-206ENST00000489304 AFF1P51825 1210 aaKnown RBP19.25■□□□□ 0.67
CD40-206ENST00000489304 CENPCQ03188 943 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 MYO1EQ12965 1108 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 PPP1R2P3Q6NXS1 205 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 LRRC8DQ7L1W4 858 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 RTN4RL1Q86UN2 441 aaPredicted RBP19.25■□□□□ 0.67
CD40-206ENST00000489304 SYCE1Q8N0S2 351 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 LRRC52Q8N7C0 313 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 ZFP42Q96MM3 310 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 SMYD3Q9H7B4 428 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 COG5Q9UP83 839 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 SQORQ9Y6N5 450 aa19.25■□□□□ 0.67
CD40-206ENST00000489304 NCK2O43639 380 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 SRGAP2O75044 1071 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 PAEPP09466 180 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 ITGA4P13612 1032 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 SELPP16109 830 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 CYP3A5P20815 502 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 RAP1GAPP47736 663 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 NOMO3P69849 1222 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 PKN2Q16513 984 aaKnown RBP19.24■□□□□ 0.67
CD40-206ENST00000489304 TRIM60Q495X7 471 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 TTC39CQ8N584 583 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 CAGE1Q8TC20 777 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 LINC01599Q8WXQ3 324 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 TSC1Q92574 1164 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 CYFIP2Q96F07 1278 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 OSBPL9Q96SU4 736 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 SEZ6LQ9BYH1 1024 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 PDCL3Q9H2J4 239 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 MIOSQ9NXC5 875 aa19.24■□□□□ 0.67
CD40-206ENST00000489304 PTGESO14684 152 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 TLR3O15455 904 aaKnown RBP19.23■□□□□ 0.67
CD40-206ENST00000489304 CILPO75339 1184 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 CFHP08603 1231 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 COL6A1P12109 1028 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 ATF7P17544 494 aaPredicted RBP19.23■□□□□ 0.67
CD40-206ENST00000489304 CDH8P55286 799 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 TNNC1P63316 161 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 SOX4Q06945 474 aaPredicted RBP19.23■□□□□ 0.67
CD40-206ENST00000489304 INCA1Q0VD86 236 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 C9orf57Q5W0N0 161 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 AGMOQ6ZNB7 445 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 MRPL10Q7Z7H8 261 aaKnown RBP19.23■□□□□ 0.67
CD40-206ENST00000489304 MCOLN2Q8IZK6 566 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 USP38Q8NB14 1042 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 WHAMMQ8TF30 809 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 ZNF653Q96CK0 615 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 TRIM11Q96F44 468 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 TRAIPQ9BWF2 469 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 GOLGA2P5Q9HBQ8 144 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 CTTNBP2NLQ9P2B4 639 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 STXBP5LQ9Y2K9 1186 aa19.23■□□□□ 0.67
CD40-206ENST00000489304 BUB1BO60566 1050 aaPredicted RBP19.22■□□□□ 0.67
CD40-206ENST00000489304 NBNO60934 754 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 LSM8O95777 96 aaKnown RBP19.22■□□□□ 0.67
CD40-206ENST00000489304 MYBL1P10243 752 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 GJA8P48165 433 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 RAD23BP54727 409 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 TLE2Q04725 743 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 NAA30Q147X3 362 aaPredicted RBP19.22■□□□□ 0.67
CD40-206ENST00000489304 NAA35Q5VZE5 725 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 RSRC2Q7L4I2 434 aaKnown RBP19.22■□□□□ 0.67
CD40-206ENST00000489304 HACE1Q8IYU2 909 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 RNF169Q8NCN4 708 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 VCPIP1Q96JH7 1222 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 ZSWIM1Q9BR11 485 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 AVENQ9NQS1 362 aaPredicted RBP19.22■□□□□ 0.67
CD40-206ENST00000489304 UVRAGQ9P2Y5 699 aa19.22■□□□□ 0.67
CD40-206ENST00000489304 PUF60Q9UHX1 559 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms