RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TMEM8AQ9HCN3 771 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 ZC4H2Q9NQZ6 224 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 SNRPAP09012 282 aaKnown RBP18.43■□□□□ 0.54
NPHP4-209ENST00000489180 RARBP10826 455 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 ARHGEF6Q15052 776 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 PABPC5Q96DU9 382 aaKnown RBP18.43■□□□□ 0.54
NPHP4-209ENST00000489180 ERGIC2Q96RQ1 377 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 PACSIN1Q9BY11 444 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 NOD2Q9HC29 1040 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 TRAPPC11Q7Z392 1133 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 ATG4AQ8WYN0 398 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 E2F7Q96AV8 911 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 NEUROG2Q9H2A3 272 aa18.43■□□□□ 0.54
NPHP4-209ENST00000489180 CHRNA5P30532 468 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 PRKCEQ02156 737 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 C2CD6Q53TS8 623 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 ADCK1Q86TW2 530 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 SPATA2LQ8IUW3 424 aaPredicted RBP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 NSL1Q96IY1 281 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 PCDHB2Q9Y5E7 798 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 KIAA0391O15091 583 aaKnown RBP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 ARHGEF9O43307 516 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 RPS6P62753 249 aaKnown RBP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 HNRNPLLQ8WVV9 542 aaKnown RBP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 DLGAP2Q9P1A6 1054 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 PCDHGB4Q9UN71 923 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 FAXCQ5TGI0 409 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 CAPN6Q9Y6Q1 641 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 ADGRA2Q96PE1 1338 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 EIF3DO15371 548 aaKnown RBP eCLIP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 KLHL2O95198 593 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 TRPC1P48995 793 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 INPP5DQ92835 1189 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 PAK5Q9P286 719 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 A0A087X0T9 212 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 ZBTB39O15060 712 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 CAND2O75155 1236 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 CSF1RP07333 972 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 FAM228BP0C875 321 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 ATP6V1E1P36543 226 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 CENPCQ03188 943 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 KDM7AQ6ZMT4 941 aa18.42■□□□□ 0.54
NPHP4-209ENST00000489180 APOBEC3FQ8IUX4 373 aaKnown RBP18.42■□□□□ 0.54
NPHP4-209ENST00000489180 VCAM1P19320 739 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 NNMTP40261 264 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 GEMIN4P57678 1058 aaKnown RBP18.41■□□□□ 0.54
NPHP4-209ENST00000489180 KYAT1Q16773 422 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 SLC30A9Q6PML9 568 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 TEX9Q8N6V9 391 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 RBP3P10745 1247 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 KRT72Q14CN4 511 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
NPHP4-209ENST00000489180 TTC23LQ6PF05 361 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 LRRC71Q8N4P6 559 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 C2orf69Q8N8R5 385 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 FEZF2Q8TBJ5 459 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 SUPT3HB4E1H0 165 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 NPEPPSP55786 919 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 ABCE1P61221 599 aaKnown RBP18.41■□□□□ 0.54
NPHP4-209ENST00000489180 PTPAQ15257 358 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 TRADDQ15628 312 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 OR6J1Q8NGC5 347 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 B4GALNT2Q8NHY0 566 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 MAP3K14Q99558 947 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 RUSC1Q9BVN2 902 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 DAB2IPQ5VWQ8 1189 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 SLC13A5Q86YT5 568 aaPredicted RBP18.41■□□□□ 0.54
NPHP4-209ENST00000489180 KIAA2013Q8IYS2 634 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
NPHP4-209ENST00000489180 CMTM5Q96DZ9 223 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 FAM111AQ96PZ2 611 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 KCND2Q9NZV8 630 aa18.41■□□□□ 0.54
NPHP4-209ENST00000489180 SGPL1O95470 568 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 RFX5P48382 616 aaPredicted RBP18.4■□□□□ 0.54
NPHP4-209ENST00000489180 PLOD1Q02809 727 aaPredicted RBP18.4■□□□□ 0.54
NPHP4-209ENST00000489180 GOLGA7BQ2TAP0 167 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 RRM2BQ7LG56 351 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 PPIL6Q8IXY8 311 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 C1orf131Q8NDD1 294 aaKnown RBP18.4■□□□□ 0.54
NPHP4-209ENST00000489180 IPMKQ8NFU5 416 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 ZNF512BQ96KM6 892 aaPredicted RBP18.4■□□□□ 0.54
NPHP4-209ENST00000489180 DNAJC7Q99615 494 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 H0Y626 953 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 TRIM16O95361 564 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 PYGLP06737 847 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 NR3C2P08235 984 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 GPD1P21695 349 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 RPA1P27694 616 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 SLC7A14Q8TBB6 771 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 BATF3Q9NR55 127 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 DAB1O75553 588 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 SPRP35270 261 aaPredicted RBP18.4■□□□□ 0.54
NPHP4-209ENST00000489180 SEZ6Q53EL9 994 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 CYB5D1Q6P9G0 228 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 ARID3BQ8IVW6 561 aaPredicted RBP18.4■□□□□ 0.54
NPHP4-209ENST00000489180 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 SCFD1Q8WVM8 642 aa18.4■□□□□ 0.54
NPHP4-209ENST00000489180 TEKT4Q8WW24 435 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms