RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZC3H10Q96K80 434 aaKnown RBP17.68■□□□□ 0.42
USP48-210ENST00000489108 TMEM209Q96SK2 561 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 TARS2Q9BW92 718 aaKnown RBP17.68■□□□□ 0.42
USP48-210ENST00000489108 ATXN3LQ9H3M9 355 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
USP48-210ENST00000489108 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 SLC8A2Q9UPR5 921 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 SLC27A5Q9Y2P5 690 aa17.68■□□□□ 0.42
USP48-210ENST00000489108 CCDC169A6NNP5 214 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 OAZ2O95190 189 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 SPINK2P20155 84 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 MCM7P33993 719 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 ALDH1A3P47895 512 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 NOVA1P51513 510 aaKnown RBP17.67■□□□□ 0.42
USP48-210ENST00000489108 YWHAHQ04917 246 aaPredicted RBP17.67■□□□□ 0.42
USP48-210ENST00000489108 FOXC1Q12948 553 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 PLD1Q13393 1074 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 ITPRIPL2Q3MIP1 535 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 PLK5Q496M5 336 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 DNAJB7Q7Z6W7 309 aaPredicted RBP17.67■□□□□ 0.42
USP48-210ENST00000489108 BPIFB1Q8TDL5 484 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 TCHPQ9BT92 498 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 MRPL4Q9BYD3 311 aaKnown RBP17.67■□□□□ 0.42
USP48-210ENST00000489108 OBP2AQ9NY56 170 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 SPEGQ15772 3267 aa17.67■□□□□ 0.42
USP48-210ENST00000489108 NUP210Q8TEM1 1887 aaPredicted RBP17.67■□□□□ 0.42
USP48-210ENST00000489108 C4orf47A7E2U8 309 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 AKAP3O75969 853 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 MCF2P10911 925 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 GABRR2P28476 465 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 PEX3P56589 373 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 ACAP1Q15027 740 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 ECM1Q16610 540 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 FSTL4Q6MZW2 842 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
USP48-210ENST00000489108 TAS1R3Q7RTX0 852 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 ZBTB45Q96K62 511 aaPredicted RBP17.66■□□□□ 0.42
USP48-210ENST00000489108 WASF3Q9UPY6 502 aa17.66■□□□□ 0.42
USP48-210ENST00000489108 M0QZQ0 153 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 ABLIM1O14639 778 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 ATG13O75143 517 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 SOAT2O75908 522 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 PRAMEF12O95522 483 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 TOP3BO95985 862 aaKnown RBP17.65■□□□□ 0.42
USP48-210ENST00000489108 HARSP12081 509 aaKnown RBP17.65■□□□□ 0.42
USP48-210ENST00000489108 PROZP22891 400 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 NPTX2P47972 431 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 FOSBP53539 338 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 GPR17Q13304 367 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 SLC10A6Q3KNW5 377 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 SEZ6Q53EL9 994 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 CENPPQ6IPU0 288 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 DIS3L2Q8IYB7 885 aaKnown RBP17.65■□□□□ 0.42
USP48-210ENST00000489108 ATAD1Q8NBU5 361 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 ERMNQ8TAM6 284 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 EDEM2Q9BV94 578 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 TMEM121BQ9BXQ6 578 aaPredicted RBP17.65■□□□□ 0.42
USP48-210ENST00000489108 DUSP15Q9H1R2 295 aaPredicted RBP17.65■□□□□ 0.42
USP48-210ENST00000489108 BHMT2Q9H2M3 363 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 TMEM134Q9H6X4 195 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 GKN1Q9NS71 199 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 TUBGCP4Q9UGJ1 667 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 ASB3Q9Y575 518 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 ZFYVE26Q68DK2 2539 aa17.65■□□□□ 0.42
USP48-210ENST00000489108 DCLK1O15075 740 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 CREB5Q02930 508 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 ZNF252P-AS1Q0IIN9 211 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 GRSF1Q12849 480 aaKnown RBP eCLIP17.64■□□□□ 0.41
USP48-210ENST00000489108 ARHGAP15Q53QZ3 475 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 TMEM196Q5HYL7 178 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 MPZL3Q6UWV2 235 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 CAMKK1Q8N5S9 505 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 TTC9BQ8N6N2 239 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 PSMG2Q969U7 264 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 SMG9Q9H0W8 520 aaKnown RBP17.64■□□□□ 0.41
USP48-210ENST00000489108 TASP1Q9H6P5 420 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 THG1LQ9NWX6 298 aaKnown RBP17.64■□□□□ 0.41
USP48-210ENST00000489108 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
USP48-210ENST00000489108 CAVIN2O95810 425 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 WEE1P30291 646 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 CYP4F8P98187 520 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 SPAG1Q07617 926 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 PTPAQ15257 358 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 SH3PXD2AQ5TCZ1 1133 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 USP37Q86T82 979 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 CHFRQ96EP1 664 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 HHIPQ96QV1 700 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 OXCT2Q9BYC2 517 aaPredicted RBP17.63■□□□□ 0.41
USP48-210ENST00000489108 FBRSL1Q9HCM7 1045 aaKnown RBP17.63■□□□□ 0.41
USP48-210ENST00000489108 ARHGAP28Q9P2N2 729 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 IGF2RP11717 2491 aa17.63■□□□□ 0.41
USP48-210ENST00000489108 FASNP49327 2511 aaKnown RBP17.62■□□□□ 0.41
USP48-210ENST00000489108 MTMR11A4FU01 709 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 OTOL1A6NHN0 477 aaPredicted RBP17.62■□□□□ 0.41
USP48-210ENST00000489108 OR6C75A6NL08 312 aa17.62■□□□□ 0.41
USP48-210ENST00000489108 TRDMT1O14717 391 aaKnown RBP17.62■□□□□ 0.41
USP48-210ENST00000489108 EPB41L2O43491 1005 aaKnown RBP17.62■□□□□ 0.41
USP48-210ENST00000489108 RNF40O75150 1001 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms