RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 GTF3C4Q9UKN8 822 aa21.57■■□□□ 1.04
NECAB3-213ENST00000488489 SCN1AP35498 2009 aa21.57■■□□□ 1.04
NECAB3-213ENST00000488489 CTSHP09668 335 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 ATICP31939 592 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 CENPCQ03188 943 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 GPS2Q13227 327 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 C2CD6Q53TS8 623 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 GLRA4Q5JXX5 417 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 SESTD1Q86VW0 696 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 SYCE1Q8N0S2 351 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 CAGE1Q8TC20 777 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 ZNF653Q96CK0 615 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 RALGAPA2Q2PPJ7 1873 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 YARSP54577 528 aaKnown RBP21.56■■□□□ 1.04
NECAB3-213ENST00000488489 CKAP4Q07065 602 aaKnown RBP21.56■■□□□ 1.04
NECAB3-213ENST00000488489 MCOLN2Q8IZK6 566 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 PXYLP1Q8TE99 480 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 TFAP2BQ92481 460 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 C18orf25Q96B23 403 aaPredicted RBP21.56■■□□□ 1.04
NECAB3-213ENST00000488489 OSBPL7Q9BZF2 842 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 TUBGCP4Q9UGJ1 667 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 TRPV2Q9Y5S1 764 aa21.56■■□□□ 1.04
NECAB3-213ENST00000488489 H3BQF6 201 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 BRD2P25440 801 aaKnown RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 NOMO3P69849 1222 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 RBP5P82980 135 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 HDXQ7Z353 690 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 SMG8Q8ND04 991 aaKnown RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 HES6Q96HZ4 224 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 SENP6Q9GZR1 1112 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 KLK14Q9P0G3 267 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 CNTN3Q9P232 1028 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 PPEF2O14830 753 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 MTA2O94776 668 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 HNRNPH2P55795 449 aaKnown RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 ZNF572Q7Z3I7 529 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 PCSK9Q8NBP7 692 aaKnown RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 WHAMMQ8TF30 809 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 ZNF296Q8WUU4 475 aaPredicted RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 FAXDC2Q96IV6 333 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 NUP85Q9BW27 656 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 CNOT8Q9UFF9 292 aaKnown RBP21.55■■□□□ 1.04
NECAB3-213ENST00000488489 DERAQ9Y315 318 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 IPPQ9Y573 584 aa21.55■■□□□ 1.04
NECAB3-213ENST00000488489 M0QZ92 97 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 KCNK3O14649 394 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 PTGISQ16647 500 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 LLGL2Q6P1M3 1020 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 MON1BQ7L1V2 547 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 RSPH3Q86UC2 560 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 ARRDC4Q8NCT1 418 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 PSD3Q9NYI0 1048 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 HMGXB4Q9UGU5 601 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 ST3GAL5Q9UNP4 418 aa21.54■■□□□ 1.04
NECAB3-213ENST00000488489 TUBBP07437 444 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RRM1P23921 792 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 NSFP46459 744 aaKnown RBP21.53■■□□□ 1.04
NECAB3-213ENST00000488489 MGAT3Q09327 533 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 ORC1Q13415 861 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 TRIM72Q6ZMU5 477 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 PHLDB2Q86SQ0 1253 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RNF180Q86T96 592 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RPAINQ86UA6 219 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 EXOC4Q96A65 974 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 BTBD6Q96KE9 485 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 TWNKQ96RR1 684 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 AMFRQ9UKV5 643 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 ALG6Q9Y672 507 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RPS6KA5O75582 802 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 GNRH1P01148 92 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 INHAP05111 366 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RHOXF2BP0C7M4 288 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 ACLYP53396 1101 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RAD23BP54727 409 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 C2orf54Q08AI8 447 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 TWF2Q6IBS0 349 aaKnown RBP21.53■■□□□ 1.04
NECAB3-213ENST00000488489 SPATA4Q8NEY3 305 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 ZNF564Q8TBZ8 553 aaPredicted RBP21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RPGRIP1Q96KN7 1286 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 RHOXF2Q9BQY4 288 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 TRMT13Q9NUP7 481 aaKnown RBP21.53■■□□□ 1.04
NECAB3-213ENST00000488489 PARP2Q9UGN5 583 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 L1RE1Q9UN81 338 aa21.53■■□□□ 1.04
NECAB3-213ENST00000488489 SMIM28A0A1B0GU29 152 aa21.52■■□□□ 1.04
NECAB3-213ENST00000488489 STAU1O95793 577 aaKnown RBP21.52■■□□□ 1.04
NECAB3-213ENST00000488489 NFX1Q12986 1120 aaKnown RBP21.52■■□□□ 1.04
NECAB3-213ENST00000488489 ITGA7Q13683 1181 aa21.52■■□□□ 1.04
NECAB3-213ENST00000488489 PDCD11Q14690 1871 aaKnown RBP21.52■■□□□ 1.04
NECAB3-213ENST00000488489 XKR4Q5GH76 650 aa21.52■■□□□ 1.04
NECAB3-213ENST00000488489 CCDC181Q5TID7 509 aa21.52■■□□□ 1.04
NECAB3-213ENST00000488489 LHX8Q68G74 356 aa21.52■■□□□ 1.04
NECAB3-213ENST00000488489 CILPO75339 1184 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 THPOP40225 353 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 RNASE9P60153 205 aaKnown RBP21.52■■□□□ 1.03
NECAB3-213ENST00000488489 YWHAEP62258 255 aaKnown RBP21.52■■□□□ 1.03
NECAB3-213ENST00000488489 PTP4A2Q12974 167 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 MESDQ14696 234 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 C11orf63Q6NUN7 778 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 CPNE8Q86YQ8 564 aa21.52■■□□□ 1.03
NECAB3-213ENST00000488489 C11orf70Q9BRQ4 267 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms