RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RASAL2Q9UJF2 1139 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 GJD2Q9UKL4 321 aa12.73□□□□□ -0.37
PKP4-213ENST00000486254 PODXLO00592 558 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 FSCN2O14926 492 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
PKP4-213ENST00000486254 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
PKP4-213ENST00000486254 RBP5P82980 135 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 MFSD10Q14728 455 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 STILQ15468 1287 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 JADE1Q6IE81 842 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 SLC13A5Q86YT5 568 aaPredicted RBP12.72□□□□□ -0.37
PKP4-213ENST00000486254 KLHL7Q8IXQ5 586 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 C3orf20Q8ND61 904 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 FNIP1Q8TF40 1166 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 CPA5Q8WXQ8 436 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 SCLT1Q96NL6 688 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 DDX47Q9H0S4 455 aaKnown RBP12.72□□□□□ -0.37
PKP4-213ENST00000486254 WDR35Q9P2L0 1181 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 IP6K2Q9UHH9 426 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 KIAA1257Q9ULG3 409 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 UTP11Q9Y3A2 253 aaKnown RBP12.72□□□□□ -0.37
PKP4-213ENST00000486254 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
PKP4-213ENST00000486254 SCN10AQ9Y5Y9 1956 aa12.72□□□□□ -0.37
PKP4-213ENST00000486254 DYNC1LI2O43237 492 aaPredicted RBP12.71□□□□□ -0.37
PKP4-213ENST00000486254 CILPO75339 1184 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 GNAT1P11488 350 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 ITGA4P13612 1032 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 ECHS1P30084 290 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 POLR2BP30876 1174 aaKnown RBP12.71□□□□□ -0.37
PKP4-213ENST00000486254 HOXA11P31270 313 aaPredicted RBP12.71□□□□□ -0.37
PKP4-213ENST00000486254 HSPA9P38646 679 aaKnown RBP12.71□□□□□ -0.37
PKP4-213ENST00000486254 CARSP49589 748 aaKnown RBP12.71□□□□□ -0.37
PKP4-213ENST00000486254 PSEN2P49810 448 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 TERF2Q15554 542 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 SND1Q7KZF4 910 aaKnown RBP eCLIP12.71□□□□□ -0.37
PKP4-213ENST00000486254 TMEM192Q8IY95 271 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 KATNAL2Q8IYT4 538 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 LRRC52Q8N7C0 313 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 GOLGA6L1Q8N7Z2 621 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 FEZF2Q8TBJ5 459 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 LRRC45Q96CN5 670 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 ZBTB10Q96DT7 871 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 SNX27Q96L92 541 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 SH3GL2Q99962 352 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 AP1M1Q9BXS5 423 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 LRRC19Q9H756 370 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 NMRK2Q9NPI5 230 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 HOMER3Q9NSC5 361 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 SETD4Q9NVD3 440 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 PSD3Q9NYI0 1048 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 FLRT1Q9NZU1 646 aa12.71□□□□□ -0.37
PKP4-213ENST00000486254 GOLGA6BA6NDN3 693 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 TMEM191CA6NGB0 347 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 H3BQF6 201 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
PKP4-213ENST00000486254 HMGCRP04035 888 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 PYGMP11217 842 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 AKR1A1P14550 325 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 PTPN7P35236 360 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 TM4SF4P48230 202 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 MARCKSL1P49006 195 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 RNASE9P60153 205 aaKnown RBP12.7□□□□□ -0.38
PKP4-213ENST00000486254 LACTBP83111 547 aaPredicted RBP12.7□□□□□ -0.38
PKP4-213ENST00000486254 DR1Q01658 176 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 WDR72Q3MJ13 1102 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 MMS22LQ6ZRQ5 1243 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
PKP4-213ENST00000486254 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 ELMO3Q96BJ8 720 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
PKP4-213ENST00000486254 MIS12Q9H081 205 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 CNTN3Q9P232 1028 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 AMACRQ9UHK6 382 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 NFU1Q9UMS0 254 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
PKP4-213ENST00000486254 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 FAM155AB1AL88 458 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 OPA1O60313 960 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 ITGB3P05106 788 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 WEE2P0C1S8 567 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 CYP2C9P11712 490 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 RAD23BP54727 409 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 OSTNP61366 133 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 PTPN11Q06124 597 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 MTMR3Q13615 1198 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 PIGHQ14442 188 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 SIX1Q15475 284 aaPredicted RBP12.69□□□□□ -0.38
PKP4-213ENST00000486254 ZBTB6Q15916 424 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 PTPROQ16827 1216 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 XKR4Q5GH76 650 aa12.69□□□□□ -0.38
PKP4-213ENST00000486254 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms