RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
PTCD1-205ENST00000485746 HUS1O60921 280 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 ABLIM3O94929 683 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 OAZ2O95190 189 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 OR4Q2P0C623 313 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 ATF2P15336 505 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 HOXA9P31269 272 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 CYP24A1Q07973 514 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 TRPC3Q13507 836 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 MYBPC2Q14324 1141 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 PSMD6Q15008 389 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 TMEM31Q5JXX7 168 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 WSCD1Q658N2 575 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 CEP135Q66GS9 1140 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 RNF19BQ6ZMZ0 732 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 C12orf56Q8IXR9 622 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 ZDHHC14Q8IZN3 488 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 LRRC52Q8N7C0 313 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 SMARCE1Q969G3 411 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 PGLYRP2Q96PD5 576 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 CGRRF1Q99675 332 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
PTCD1-205ENST00000485746 MAFFQ9ULX9 164 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 FRMD4BQ9Y2L6 1034 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
PTCD1-205ENST00000485746 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 NR3C1P04150 777 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 CYP11A1P05108 521 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 PTPN2P17706 415 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 BIRC3Q13489 604 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
PTCD1-205ENST00000485746 IQCEQ6IPM2 695 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 TCEAL8Q8IYN2 117 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 ZNF512Q96ME7 567 aaPredicted RBP13.47□□□□□ -0.25
PTCD1-205ENST00000485746 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
PTCD1-205ENST00000485746 CITO14578 2027 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 SEC24AO95486 1093 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 RPL13P26373 211 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 ALDH1A3P47895 512 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 NTHL1P78549 312 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 MYL7Q01449 175 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 TSPY1Q01534 308 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 TWF1Q12792 350 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 GPR17Q13304 367 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 PLD1Q13393 1074 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 PABPC1LQ4VXU2 614 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 SLC39A12Q504Y0 691 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 DCP1BQ8IZD4 617 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 GUF1Q8N442 669 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 ENGASEQ8NFI3 743 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 MMS19Q96T76 1030 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 CORO1BQ9BR76 489 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 GTPBP4Q9BZE4 634 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 KCTD10Q9H3F6 313 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 DNMT3BQ9UBC3 853 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.25
PTCD1-205ENST00000485746 INSL5Q9Y5Q6 135 aa13.46□□□□□ -0.25
PTCD1-205ENST00000485746 GADD45BO75293 160 aaPredicted RBP13.45□□□□□ -0.26
PTCD1-205ENST00000485746 ASGR2P07307 311 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 KRT13P13646 458 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 AP3M2P53677 418 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 EPHB3P54753 998 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 TNNC1P63316 161 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 ZXDAP98168 799 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 DUSP4Q13115 394 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 STIM1Q13586 685 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 TAF12Q16514 161 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 PTPN21Q16825 1174 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 CYP4A22Q5TCH4 519 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 SMYD4Q8IYR2 804 aaPredicted RBP13.45□□□□□ -0.26
PTCD1-205ENST00000485746 PDCL2Q8N4E4 241 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 EDAQ92838 391 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
PTCD1-205ENST00000485746 BORCS6Q96GS4 357 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 MYADMQ96S97 322 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 TMEM209Q96SK2 561 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 TSG101Q99816 390 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 DMAC2Q9NW81 257 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 HCFC1R1Q9NWW0 138 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 SIX4Q9UIU6 781 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 SORCS3Q9UPU3 1222 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 BRWD1Q9NSI6 2320 aa13.45□□□□□ -0.26
PTCD1-205ENST00000485746 PTPRJQ12913 1337 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 TRIP11Q15643 1979 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 ZNF197O14709 1029 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 RHOP08100 348 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 POU2F2P09086 479 aa13.44□□□□□ -0.26
PTCD1-205ENST00000485746 NR2F2P24468 414 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms