RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
HDGF-208ENST00000482651 FAM237AA0A1B0GTK4 181 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 CLDN3O15551 220 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
HDGF-208ENST00000482651 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
HDGF-208ENST00000482651 TBCAO75347 108 aaKnown RBP9.53□□□□□ -0.88
HDGF-208ENST00000482651 LETM1O95202 739 aaPredicted RBP9.53□□□□□ -0.88
HDGF-208ENST00000482651 WEE2P0C1S8 567 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 HARSP12081 509 aaKnown RBP9.53□□□□□ -0.88
HDGF-208ENST00000482651 KCNE1P15382 129 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 SP100P23497 879 aaPredicted RBP9.53□□□□□ -0.88
HDGF-208ENST00000482651 ABCD1P33897 745 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 RTP2Q5QGT7 225 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 CCDC183Q5T5S1 534 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 FAM171A1Q5VUB5 890 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 PDXDC1Q6P996 788 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 DCLRE1AQ6PJP8 1040 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 BRICD5Q6PL45 260 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 CYP26C1Q6V0L0 522 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 C15orf39Q6ZRI6 1047 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 USP49Q70CQ1 688 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 HAUS6Q7Z4H7 955 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 MYCT1Q8N699 235 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 EDAQ92838 391 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 BICD1Q96G01 975 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 TIGD1Q96MW7 591 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 PLEKHA4Q9H4M7 779 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 ANKFY1Q9P2R3 1169 aa9.53□□□□□ -0.88
HDGF-208ENST00000482651 K7ENM7 598 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 MEFVO15553 781 aaPredicted RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 TGM5O43548 720 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 TRAPPC3O43617 180 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 FZD6O60353 706 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 B3GAT3O94766 335 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 ZNF202O95125 648 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 PAPLNO95428 1278 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 PIGRP01833 764 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 FGFR3P22607 806 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 LIG4P49917 911 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 CLCNKBP51801 687 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 NDUFA8P51970 172 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 ZXDAP98168 799 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 SOX4Q06945 474 aaPredicted RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 PSMD5Q16401 504 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 PTPN21Q16825 1174 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 UPP1Q16831 310 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 LILRA6Q6PI73 481 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 PRSS55Q6UWB4 352 aaPredicted RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 CD300LGQ6UXG3 332 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 CCDC149Q6ZUS6 474 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 CEP57Q86XR8 500 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 PALB2Q86YC2 1186 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 MAP4K3Q8IVH8 894 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 ZDHHC14Q8IZN3 488 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 TDRD5Q8NAT2 981 aaKnown RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 RNF214Q8ND24 703 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 LNX1Q8TBB1 728 aaPredicted RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 FEZF2Q8TBJ5 459 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 ZMAT2Q96NC0 199 aaKnown RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 FIZ1Q96SL8 496 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 GTPBP4Q9BZE4 634 aaKnown RBP9.52□□□□□ -0.89
HDGF-208ENST00000482651 ZHX3Q9H4I2 956 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 GOLGA2P5Q9HBQ8 144 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 ZDHHC7Q9NXF8 308 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 RAPGEFL1Q9UHV5 662 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 TBX20Q9UMR3 447 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 HPSEQ9Y251 543 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.89
HDGF-208ENST00000482651 CCDC195A0A1B0GUA6 201 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 PODXLO00592 558 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 HNRNPDLO14979 420 aaKnown RBP9.51□□□□□ -0.89
HDGF-208ENST00000482651 SMC2O95347 1197 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 CLTAP09496 248 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 GAP43P17677 238 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 IGFBP6P24592 240 aaPredicted RBP9.51□□□□□ -0.89
HDGF-208ENST00000482651 RPL9P32969 192 aaKnown RBP9.51□□□□□ -0.89
HDGF-208ENST00000482651 MATR3P43243 847 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDGF-208ENST00000482651 GTF2BQ00403 316 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 ARID5AQ03989 594 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 KYAT1Q16773 422 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 SLC10A6Q3KNW5 377 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 SEZ6Q53EL9 994 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 STXBP4Q6ZWJ1 553 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 CCDC65Q8IXS2 484 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 ELOA2Q8IYF1 753 aaPredicted RBP9.51□□□□□ -0.89
HDGF-208ENST00000482651 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDGF-208ENST00000482651 KREMEN2Q8NCW0 462 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 ARMC2Q8NEN0 867 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 ZNF707Q96C28 371 aaPredicted RBP9.51□□□□□ -0.89
HDGF-208ENST00000482651 ACSF2Q96CM8 615 aaPredicted RBP9.51□□□□□ -0.89
HDGF-208ENST00000482651 CLSTN3Q9BQT9 956 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 HAPLN2Q9GZV7 340 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 SAP130Q9H0E3 1048 aa9.51□□□□□ -0.89
HDGF-208ENST00000482651 OSBPL2Q9H1P3 480 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms