RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GABRDO14764 452 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 B4GALT3O60512 393 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 SGPL1O95470 568 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 CAPN2P17655 700 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 FPR2P25090 351 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 GCLCP48506 637 aaPredicted RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 TERF1P54274 439 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 HMGCS2P54868 508 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 IRX3P78415 501 aaPredicted RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 SPP2Q13103 211 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 GBX1Q14549 363 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 SAFBQ15424 915 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLK1-212ENST00000482590 CR1LQ2VPA4 569 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 MINDY4Q4G0A6 757 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 TREML2Q5T2D2 321 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 C1QTNF12Q5T7M4 302 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 GTF2IRD2BQ6EKJ0 949 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 GLB1LQ6UWU2 654 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 GTF2IRD2Q86UP8 949 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 FTSJ3Q8IY81 847 aaKnown RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 TTC30BQ8N4P2 665 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 NPLOC4Q8TAT6 608 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 FRS2Q8WU20 508 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 LCORQ96JN0 433 aaPredicted RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 DHX36Q9H2U1 1008 aaKnown RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 TMOD4Q9NZQ9 345 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 TRHDEQ9UKU6 1024 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 CTDP1Q9Y5B0 961 aaPredicted RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 NR2E3Q9Y5X4 410 aa7.53□□□□□ -1.2
CLK1-212ENST00000482590 RANBP2P49792 3224 aaKnown RBP7.53□□□□□ -1.2
CLK1-212ENST00000482590 TNKSO95271 1327 aa7.52□□□□□ -1.2
CLK1-212ENST00000482590 ZNF236Q9UL36 1845 aa7.52□□□□□ -1.2
CLK1-212ENST00000482590 BRINP1O60477 761 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 NBNO60934 754 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 HMGCRP04035 888 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 HLA-DOAP06340 250 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 ASNSP08243 561 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 RBP3P10745 1247 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 RRM1P23921 792 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 STRN3Q13033 797 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 ADAM9Q13443 819 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 STAT4Q14765 748 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 COBLL1Q53SF7 1204 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 PPP4R3AQ6IN85 833 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 CNNM4Q6P4Q7 775 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 LVRNQ6Q4G3 990 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 EEPD1Q7L9B9 569 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 SPATS2Q86XZ4 545 aaKnown RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 RIOX2Q8IUF8 465 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 MAPKAPK5Q8IW41 473 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 AHI1Q8N157 1196 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 CLASRPQ8N2M8 674 aaKnown RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 PPM1KQ8N3J5 372 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 VPS37AQ8NEZ2 397 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 SH3RF3Q8TEJ3 882 aaPredicted RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 SECISBP2LQ93073 1101 aaKnown RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 KISS1RQ969F8 398 aaPredicted RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 CLUHP3Q96NS8 147 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 DEFB118Q96PH6 123 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 LGR4Q9BXB1 951 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLK1-212ENST00000482590 CYP26B1Q9NR63 512 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 PI4KBQ9UBF8 816 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 EVLQ9UI08 416 aaPredicted RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 TNNQ9UQP3 1299 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 MORC2Q9Y6X9 1032 aaPredicted RBP7.52□□□□□ -1.21
CLK1-212ENST00000482590 FPGT-TNNI3KV9GXZ4 949 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 MYH4Q9Y623 1939 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 FLT1P17948 1338 aa7.52□□□□□ -1.21
CLK1-212ENST00000482590 ARNTLO00327 626 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 BCAR3O75815 825 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 NPTXRO95502 500 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 TFRCP02786 760 aaKnown RBP7.51□□□□□ -1.21
CLK1-212ENST00000482590 ZNF28P17035 718 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 BIRC3Q13489 604 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 DHCR24Q15392 516 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 CDSNQ15517 529 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 MROH9Q5TGP6 573 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 SYDE2Q5VT97 1194 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 MZT2AQ6P582 158 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 SPRED1Q7Z699 444 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 LRRC47Q8N1G4 583 aaKnown RBP7.51□□□□□ -1.21
CLK1-212ENST00000482590 Q8N1Y9 231 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 TMEM57Q8N5G2 664 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 TGFBRAP1Q8WUH2 860 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 LEO1Q8WVC0 666 aaPredicted RBP7.51□□□□□ -1.21
CLK1-212ENST00000482590 MRGPRX3Q96LB0 322 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 SERINC2Q96SA4 455 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 NKX2-4Q9H2Z4 354 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 TCF7L1Q9HCS4 588 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 GPR108Q9NPR9 543 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 PPP4R1LQ9P1A2 415 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 DGKBQ9Y6T7 804 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 X6R8D5 127 aa7.51□□□□□ -1.21
CLK1-212ENST00000482590 LTBP2Q14767 1821 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 C9orf118A6NHY6 69 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms