RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 PHTF1Q9UMS5 762 aa6.5□□□□□ -1.37
UPF3A-205ENST00000479712 UNC79Q9P2D8 2635 aa6.5□□□□□ -1.37
UPF3A-205ENST00000479712 CARMIL3Q8ND23 1372 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 LRRC14BA6NHZ5 514 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 DDX3XO00571 662 aaKnown RBP eCLIP6.49□□□□□ -1.37
UPF3A-205ENST00000479712 ALDH1A2O94788 518 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 SLC5A1P13866 664 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
UPF3A-205ENST00000479712 PEX2P28328 305 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 FZD5Q13467 585 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 PCOLCEQ15113 449 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 SLC4A8Q2Y0W8 1093 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 Q6ZUG5 572 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 LARP4Q71RC2 724 aaKnown RBP eCLIP6.49□□□□□ -1.37
UPF3A-205ENST00000479712 CLEC14AQ86T13 490 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 RSPH3Q86UC2 560 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 MORC1Q86VD1 984 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 REXO1L1PQ8IX06 675 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 C3orf20Q8ND61 904 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 CCHCR1Q8TD31 782 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 ZNF622Q969S3 477 aaKnown RBP eCLIP6.49□□□□□ -1.37
UPF3A-205ENST00000479712 TNIP3Q96KP6 325 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 NAA15Q9BXJ9 866 aaKnown RBP6.49□□□□□ -1.37
UPF3A-205ENST00000479712 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
UPF3A-205ENST00000479712 BCO1Q9HAY6 547 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 KLHL11Q9NVR0 708 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 POLHQ9Y253 713 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 SIK3Q9Y2K2 1263 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 TTC21AQ8NDW8 1320 aa6.49□□□□□ -1.37
UPF3A-205ENST00000479712 AFDNP55196 1824 aaKnown RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 CFAP69A5D8W1 941 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 ETV2O00321 342 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 TAL1P17542 331 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 SYN1P17600 705 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 HK3P52790 923 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 RRADP55042 308 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 WNT3AP56704 352 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 GJA9P57773 515 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 ZNF280AP59817 542 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 RAB1AP62820 205 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 TARDBPQ13148 414 aaKnown RBP eCLIP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 MORC3Q14149 939 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 LONRF1Q17RB8 773 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 SWSAP1Q6NVH7 229 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 CNKSR3Q6P9H4 555 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 MAEAQ7L5Y9 396 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 SPICE1Q8N0Z3 855 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 PQLC1Q8N2U9 271 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 PLA2G15Q8NCC3 412 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 OR7D4Q8NG98 312 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 LRTOMTQ8WZ04 291 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 GCDHQ92947 438 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 GJA10Q969M2 543 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 TMX3Q96JJ7 454 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 PWWP2AQ96N64 755 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 SAMD11Q96NU1 681 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 PDCD2LQ9BRP1 358 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 APOL5Q9BWW9 433 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 CARD11Q9BXL7 1154 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 KATNBL1Q9H079 304 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 KIAA1683Q9H0B3 1180 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 R3HDMLQ9H3Y0 253 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 ARMT1Q9H993 441 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 EPB41L4AQ9HCS5 686 aaPredicted RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 LANCL2Q9NS86 450 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 NTMQ9P121 344 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 TAGLN3Q9UI15 199 aa6.48□□□□□ -1.37
UPF3A-205ENST00000479712 RBM8AQ9Y5S9 174 aaKnown RBP6.48□□□□□ -1.37
UPF3A-205ENST00000479712 A0A088AWK7 358 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 C2orf78A6NCI8 922 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 MGEA5O60502 916 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 CYP1A1P04798 512 aaPredicted RBP6.47□□□□□ -1.37
UPF3A-205ENST00000479712 PI3P19957 117 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 SREBF1P36956 1147 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 KIR2DL3P43628 341 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 HTR3AP46098 478 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 AK2P54819 239 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 GPSM2P81274 684 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 DLX2Q07687 328 aaPredicted RBP6.47□□□□□ -1.37
UPF3A-205ENST00000479712 SSPNQ14714 243 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 C10orf62Q5T681 223 aaPredicted RBP6.47□□□□□ -1.37
UPF3A-205ENST00000479712 HEATR3Q7Z4Q2 680 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 PLBD2Q8NHP8 589 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 LPPQ93052 612 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 SLC7A6OSQ96CW6 309 aaPredicted RBP6.47□□□□□ -1.37
UPF3A-205ENST00000479712 MTFMTQ96DP5 389 aaKnown RBP6.47□□□□□ -1.37
UPF3A-205ENST00000479712 CYFIP2Q96F07 1278 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 MRGPRX4Q96LA9 322 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 DMRTA2Q96SC8 542 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 ARPC5LQ9BPX5 153 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 SPATA25Q9BR10 227 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 TMEM168Q9H0V1 697 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 LMBRD1Q9NUN5 540 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 ING3Q9NXR8 418 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 GPRC5DQ9NZD1 345 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 TRPS1Q9UHF7 1281 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 DAAM1Q9Y4D1 1078 aa6.47□□□□□ -1.37
UPF3A-205ENST00000479712 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms