RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 CYP3A43Q9HB55 503 aa15.38■□□□□ 0.05
CLDN18-203ENST00000479660 HMX1Q9NP08 348 aaPredicted RBP15.38■□□□□ 0.05
CLDN18-203ENST00000479660 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
CLDN18-203ENST00000479660 UVRAGQ9P2Y5 699 aa15.38■□□□□ 0.05
CLDN18-203ENST00000479660 RNF14Q9UBS8 474 aa15.38■□□□□ 0.05
CLDN18-203ENST00000479660 NOD1Q9Y239 953 aa15.38■□□□□ 0.05
CLDN18-203ENST00000479660 STXBP5LQ9Y2K9 1186 aa15.38■□□□□ 0.05
CLDN18-203ENST00000479660 THSD7BQ9C0I4 1608 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 SMIM28A0A1B0GU29 152 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 MTA2O94776 668 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 GRK4P32298 578 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 MGAT3Q09327 533 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 CFAP221Q4G0U5 840 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 NOA1Q8NC60 698 aaKnown RBP15.37■□□□□ 0.05
CLDN18-203ENST00000479660 C18orf25Q96B23 403 aaPredicted RBP15.37■□□□□ 0.05
CLDN18-203ENST00000479660 TRIM11Q96F44 468 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 GLT1D1Q96MS3 346 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 TRMT13Q9NUP7 481 aaKnown RBP15.37■□□□□ 0.05
CLDN18-203ENST00000479660 TUBGCP4Q9UGJ1 667 aa15.37■□□□□ 0.05
CLDN18-203ENST00000479660 UBQLN1Q9UMX0 589 aaKnown RBP15.37■□□□□ 0.05
CLDN18-203ENST00000479660 MOXD2PA6NHM9 499 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 MYBL1P10243 752 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 PRMT2P55345 433 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 PPP1R2P3Q6NXS1 205 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 TFAP2BQ92481 460 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 HES6Q96HZ4 224 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 MS4A14Q96JA4 679 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 ZSWIM1Q9BR11 485 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 ALG6Q9Y672 507 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 CEP350Q5VT06 3117 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 RALGAPA2Q2PPJ7 1873 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 GPR182O15218 404 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 TLR3O15455 904 aaKnown RBP15.36■□□□□ 0.05
CLDN18-203ENST00000479660 CILPO75339 1184 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 CD19P15391 556 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
CLDN18-203ENST00000479660 RAD23BP54727 409 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 C2CD6Q53TS8 623 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 XKR4Q5GH76 650 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 LHX8Q68G74 356 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 C11orf63Q6NUN7 778 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 MON1BQ7L1V2 547 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 PBKQ96KB5 322 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 CHST12Q9NRB3 414 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 SAGE1Q9NXZ1 904 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 EHD2Q9NZN4 543 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 ADAM22Q9P0K1 906 aa15.36■□□□□ 0.05
CLDN18-203ENST00000479660 CES2O00748 559 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 PPEF2O14830 753 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 XPOTO43592 962 aaKnown RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 CD4P01730 458 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 PAEPP09466 180 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 KCNE1P15382 129 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 RRM1P23921 792 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 PTPN11Q06124 597 aaPredicted RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 PTK7Q13308 1070 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 MESDQ14696 234 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 C9orf57Q5W0N0 161 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 ZNF572Q7Z3I7 529 aaPredicted RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 PHF13Q86YI8 300 aaPredicted RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 ARRDC4Q8NCT1 418 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 WHAMMQ8TF30 809 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 TMEM176AQ96HP8 235 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 TWNKQ96RR1 684 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 TSPAN18Q96SJ8 248 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 C11orf70Q9BRQ4 267 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 TSEN34Q9BSV6 310 aaKnown RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 AGO3Q9H9G7 860 aaKnown RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 AVENQ9NQS1 362 aaPredicted RBP15.35■□□□□ 0.05
CLDN18-203ENST00000479660 FAM105AQ9NUU6 356 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 PCDHGC3Q9UN70 934 aa15.35■□□□□ 0.05
CLDN18-203ENST00000479660 TMEM110-MUSTN1A8MSY1 372 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 MED7O43513 233 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
CLDN18-203ENST00000479660 RHOXF2BP0C7M4 288 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 ORC1Q13415 861 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 LIN9Q5TKA1 542 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 PHLDB2Q86SQ0 1253 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 LRRC52Q8N7C0 313 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 SLC4A11Q8NBS3 891 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 TMEM35BQ8NCS4 154 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 SPATA4Q8NEY3 305 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 RHOXF2Q9BQY4 288 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 SELENOOQ9BVL4 669 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 HMGXB4Q9UGU5 601 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 BARX2Q9UMQ3 279 aaPredicted RBP15.34■□□□□ 0.05
CLDN18-203ENST00000479660 TRIM17Q9Y577 477 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 CEP83Q9Y592 693 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 SNX9Q9Y5X1 595 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 PTCH2Q9Y6C5 1203 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 SCN1AP35498 2009 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 ATF7P17544 494 aaPredicted RBP15.34■□□□□ 0.05
CLDN18-203ENST00000479660 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
CLDN18-203ENST00000479660 ITIH3Q06033 890 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 C2orf54Q08AI8 447 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
CLDN18-203ENST00000479660 FBXO38Q6PIJ6 1188 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms