RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ELAVL1Q15717 326 aaKnown RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 IFIT1BQ5T764 474 aaKnown RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 ZNF572Q7Z3I7 529 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 CATIPQ7Z7H3 387 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 CHST13Q8NET6 341 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 MAFAQ8NHW3 353 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 Q8TCH9 128 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 KAT5Q92993 513 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 BORCS6Q96GS4 357 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 GUCD1Q96NT3 240 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 AJAP1Q9UKB5 411 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 RALYQ9UKM9 306 aaKnown RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 NOB1Q9ULX3 412 aaKnown RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 HDAC5Q9UQL6 1122 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 SH3BP1Q9Y3L3 701 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 ANKRD30BQ9BXX2 1392 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 N4BP2Q86UW6 1770 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 SETXQ7Z333 2677 aaKnown RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 CAPN14A8MX76 684 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 MFAP3LO75121 409 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 OFD1O75665 1012 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 IPO13O94829 963 aaKnown RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 POU2F2P09086 479 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 U2AF1L5P0DN76 240 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 GUCY1A2P33402 732 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 CDC42EP1Q00587 391 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 U2AF1Q01081 240 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 USP45Q70EL2 814 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 SGMS1Q86VZ5 419 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 ANKRD35Q8N283 1001 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 RAB24Q969Q5 203 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 CEP95Q96GE4 821 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 FAM89AQ96GI7 184 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 GTPBP4Q9BZE4 634 aaKnown RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 DEF6Q9H4E7 631 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 MOCS1Q9NZB8 636 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 STAP2Q9UGK3 403 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 ST6GALNAC2Q9UJ37 374 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 TCAF1Q9Y4C2 921 aa6.41□□□□□ -1.38
CCDC171-207ENST00000478913 CFAP20Q9Y6A4 193 aaKnown RBP6.41□□□□□ -1.38
CCDC171-207ENST00000478913 MUC6Q6W4X9 2439 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 B5MCH6 92 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 SGTAO43765 313 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 RAP2AP10114 183 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 ACO1P21399 889 aaKnown RBP6.4□□□□□ -1.38
CCDC171-207ENST00000478913 PTH1RQ03431 593 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 NOGQ13253 232 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 SP140Q13342 867 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 FAM47AQ5JRC9 791 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 MFSD14BQ5SR56 506 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 FAM102BQ5T8I3 360 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 CXorf57Q6NSI4 855 aaKnown RBP6.4□□□□□ -1.38
CCDC171-207ENST00000478913 FAM83AQ86UY5 434 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 FMNL3Q8IVF7 1028 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 DRC7Q8IY82 874 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 ELOA2Q8IYF1 753 aaPredicted RBP6.4□□□□□ -1.38
CCDC171-207ENST00000478913 TTC9BQ8N6N2 239 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 MB21D1Q8N884 522 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 CASKIN2Q8WXE0 1202 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 STON2Q8WXE9 905 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 ST8SIA2Q92186 375 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 MIEF2Q96C03 454 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 TMX3Q96JJ7 454 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 LRGUKQ96M69 825 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 AIFM3Q96NN9 605 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 CPPED1Q9BRF8 314 aaPredicted RBP6.4□□□□□ -1.38
CCDC171-207ENST00000478913 CD248Q9HCU0 757 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 SMPD4Q9NXE4 827 aa6.4□□□□□ -1.38
CCDC171-207ENST00000478913 MYBBP1AQ9BQG0 1328 aaKnown RBP6.4□□□□□ -1.39
CCDC171-207ENST00000478913 KDM6AO15550 1401 aaPredicted RBP6.4□□□□□ -1.39
CCDC171-207ENST00000478913 CRB1P82279 1406 aa6.4□□□□□ -1.39
CCDC171-207ENST00000478913 CASKIN1Q8WXD9 1431 aa6.4□□□□□ -1.39
CCDC171-207ENST00000478913 TEX33O43247 280 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 PARNO95453 639 aaKnown RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 AMY1AP04745 511 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 ALOX15P16050 662 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 DDCP20711 480 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 FPR1P21462 350 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 CHRNA5P30532 468 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 ALDH1A3P47895 512 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 SELENOPP49908 381 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 TARDBPQ13148 414 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 PGS1Q32NB8 556 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 AFMIDQ63HM1 303 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 DOK3Q7L591 496 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 XYLT1Q86Y38 959 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 WDR75Q8IWA0 830 aaKnown RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 TCEAL8Q8IYN2 117 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 MYO1HQ8N1T3 1032 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 PRR18Q8N4B5 295 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 ZNF808Q8N4W9 903 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 ZGPATQ8N5A5 531 aaKnown RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 TSR2Q969E8 191 aaKnown RBP6.39□□□□□ -1.39
CCDC171-207ENST00000478913 CLIP3Q96DZ5 547 aa6.39□□□□□ -1.39
CCDC171-207ENST00000478913 MAP3K14Q99558 947 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms