RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 SPECC1LQ69YQ0 1117 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 SPOPLQ6IQ16 392 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 TRIM65Q6PJ69 517 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.57□□□□□ -0.4
PDCD11-204ENST00000478543 ARHGEF19Q8IW93 802 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 CPLX3Q8WVH0 158 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 EDAQ92838 391 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 CASD1Q96PB1 797 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 TSPAN18Q96SJ8 248 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 SLC38A7Q9NVC3 462 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
PDCD11-204ENST00000478543 COQ4Q9Y3A0 265 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
PDCD11-204ENST00000478543 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
PDCD11-204ENST00000478543 WDR87Q6ZQQ6 2873 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 INPPL1O15357 1258 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 LINC01565O15544 149 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 LINC00271P0C7V0 271 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 TRIM21P19474 475 aaKnown RBP12.56□□□□□ -0.4
PDCD11-204ENST00000478543 CYP3A5P20815 502 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 PTPN5P54829 565 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 RBP5P82980 135 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 RNASELQ05823 741 aaKnown RBP12.56□□□□□ -0.4
PDCD11-204ENST00000478543 GOLGA8FQ08AF8 430 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 GOLGA8DPQ0D2H9 430 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 HYAL1Q12794 435 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 ZNF699Q32M78 642 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 TIGD5Q53EQ6 642 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 KLHDC7AQ5VTJ3 777 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 C9orf57Q5W0N0 161 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 CRIPAKQ8N1N5 446 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 CCDC150Q8NCX0 1101 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 TATDN2Q93075 761 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 TOP1MTQ969P6 601 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 GANQ9H2C0 597 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 NSUN3Q9H649 340 aaKnown RBP12.56□□□□□ -0.4
PDCD11-204ENST00000478543 NLRC4Q9NPP4 1024 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 TBC1D13Q9NVG8 400 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 HCSTQ9UBK5 93 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 AJAP1Q9UKB5 411 aaPredicted RBP12.56□□□□□ -0.4
PDCD11-204ENST00000478543 INSL6Q9Y581 213 aa12.56□□□□□ -0.4
PDCD11-204ENST00000478543 FRYLO94915 3013 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 TDRD15B5MCY1 1934 aaKnown RBP12.55□□□□□ -0.4
PDCD11-204ENST00000478543 TMEM221A6NGB7 291 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 M0R296 226 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 B4GALT3O60512 393 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 NOL4O94818 638 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 DDHD2O94830 711 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
PDCD11-204ENST00000478543 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
PDCD11-204ENST00000478543 TUSC3Q13454 348 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 GPM6BQ13491 265 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 IQCEQ6IPM2 695 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 PHLDB3Q6NSJ2 640 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 DPY19L2P1Q6NXN4 242 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 SCARA5Q6ZMJ2 495 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 RRAGAQ7L523 313 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 PPFIBP1Q86W92 1011 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 ZNF280BQ86YH2 543 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 GPIHBP1Q8IV16 184 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 PBXIP1Q96AQ6 731 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 HPDLQ96IR7 371 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 FAM193BQ96PV7 902 aaPredicted RBP12.55□□□□□ -0.4
PDCD11-204ENST00000478543 PAAF1Q9BRP4 392 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 APOBEC3GQ9HC16 384 aaKnown RBP12.55□□□□□ -0.4
PDCD11-204ENST00000478543 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 APEX2Q9UBZ4 518 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 DNAJC12Q9UKB3 198 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 POLIQ9UNA4 740 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■■■■ 30.4
PDCD11-204ENST00000478543 FHOD1Q9Y613 1164 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 TTC3P53804 2025 aa12.55□□□□□ -0.4
PDCD11-204ENST00000478543 ANO9A1A5B4 782 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 GOLGA6L6A8MZA4 724 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 RNF225M0QZC1 329 aaPredicted RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 PODXLO00592 558 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 DGKIO75912 1065 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 ASS1P00966 412 aaKnown RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 GYPCP04921 128 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 TPM1P09493 284 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 LRPAP1P30533 357 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 CASP14P31944 242 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 CLCNKBP51801 687 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 CCDC173Q0VFZ6 552 aa12.54□□□□□ -0.4
PDCD11-204ENST00000478543 TBX2Q13207 712 aaPredicted RBP12.54□□□□□ -0.4
PDCD11-204ENST00000478543 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms