RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 SMAD5-AS1Q9Y6J3 95 aa2.42□□□□□ -2.02
CALD1-218ENST00000478075 ADGRA2Q96PE1 1338 aa2.42□□□□□ -2.02
CALD1-218ENST00000478075 FZD9O00144 591 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 PFKMP08237 780 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 CHRM5P08912 532 aaPredicted RBP2.41□□□□□ -2.02
CALD1-218ENST00000478075 IL2RBP14784 551 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 KCNA2P16389 499 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 GATA3P23771 443 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 SSRP1Q08945 709 aaKnown RBP2.41□□□□□ -2.02
CALD1-218ENST00000478075 GNL2Q13823 731 aaKnown RBP2.41□□□□□ -2.02
CALD1-218ENST00000478075 HLXQ14774 488 aaPredicted RBP2.41□□□□□ -2.02
CALD1-218ENST00000478075 ESRP1Q6NXG1 681 aaKnown RBP2.41□□□□□ -2.02
CALD1-218ENST00000478075 FITM2Q8N6M3 262 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 ZFYVE19Q96K21 471 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 ARHGEF3Q9NR81 526 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 SIK3Q9Y2K2 1263 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 MSRB2Q9Y3D2 182 aa2.41□□□□□ -2.02
CALD1-218ENST00000478075 M0R2C6 588 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 ALOX15P16050 662 aaPredicted RBP2.4□□□□□ -2.03
CALD1-218ENST00000478075 TNFRSF8P28908 595 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 RANGAP1P46060 587 aaPredicted RBP2.4□□□□□ -2.03
CALD1-218ENST00000478075 DYRK1AQ13627 763 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 RASGRF1Q13972 1273 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 KEAP1Q14145 624 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 CCDC6Q16204 474 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 TEDDM1Q5T9Z0 273 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.4□□□□□ -2.03
CALD1-218ENST00000478075 PIP4P1Q86T03 277 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 DDX53Q86TM3 631 aaKnown RBP2.4□□□□□ -2.03
CALD1-218ENST00000478075 GATA5Q9BWX5 397 aaPredicted RBP2.4□□□□□ -2.03
CALD1-218ENST00000478075 IGSF5Q9NSI5 407 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 TRIOBPQ9H2D6 2365 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 TTC3P53804 2025 aa2.4□□□□□ -2.03
CALD1-218ENST00000478075 FNDC1Q4ZHG4 1894 aaPredicted RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 IGKV3D-20A0A0C4DH25 116 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 PTPDC1A2A3K4 754 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 UBE2Q2LH0YL09 131 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 QSOX1O00391 747 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 ELL2O00472 640 aaPredicted RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 ZNF213O14771 459 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 PDPK1O15530 556 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 TEX33O43247 280 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 FAM153BP0C7A2 387 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 PPP3CBP16298 524 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 ARID5AQ03989 594 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 ZNF268Q14587 947 aaPredicted RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 MTERF2Q49AM1 385 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 MEX3CQ5U5Q3 659 aaKnown RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 ZNF813Q6ZN06 617 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 DEF8Q6ZN54 512 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 WDR53Q7Z5U6 358 aaPredicted RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 RTF1Q92541 710 aaKnown RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 MED30Q96HR3 178 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 ELF4Q99607 663 aaPredicted RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 NTPCRQ9BSD7 190 aaKnown RBP2.39□□□□□ -2.03
CALD1-218ENST00000478075 WNT8AQ9H1J5 351 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 CDCP1Q9H5V8 836 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 CABP5Q9NP86 173 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 SPO11Q9Y5K1 396 aa2.39□□□□□ -2.03
CALD1-218ENST00000478075 GSG1L2A8MUP6 293 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 VWC2LB2RUY7 222 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 POC1B-GALNT4F8VUJ3 575 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 H7C1Q1 480 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 RAP2AP10114 183 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 SLC9A1P19634 815 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 CD40P25942 277 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 ALDH9A1P49189 494 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 ANXA11P50995 505 aaKnown RBP2.38□□□□□ -2.03
CALD1-218ENST00000478075 PGGT1BP53609 377 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 OTUD7BQ6GQQ9 843 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 ABHD15Q6UXT9 468 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 GALNT4Q8N4A0 578 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 NUDCD2Q8WVJ2 157 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 MRPL4Q9BYD3 311 aaKnown RBP2.38□□□□□ -2.03
CALD1-218ENST00000478075 CD93Q9NPY3 652 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 PLSCR4Q9NRQ2 329 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 PFDN2Q9UHV9 154 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 RPTORQ8N122 1335 aa2.38□□□□□ -2.03
CALD1-218ENST00000478075 ATRNL1Q5VV63 1379 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 CCDC163A0A0D9SF12 145 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 GLRX3O76003 335 aaKnown RBP2.37□□□□□ -2.03
CALD1-218ENST00000478075 PRSS23O95084 383 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 CD19P15391 556 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 SLC6A2P23975 617 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 CTSSP25774 331 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 SCNN1BP51168 640 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 CFHR1Q03591 330 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 ZNF844Q08AG5 666 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 KIF26BQ2KJY2 2108 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 AFMIDQ63HM1 303 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 ZCCHC8Q6NZY4 707 aaKnown RBP2.37□□□□□ -2.03
CALD1-218ENST00000478075 FGD2Q7Z6J4 655 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 SPATA2LQ8IUW3 424 aaPredicted RBP2.37□□□□□ -2.03
CALD1-218ENST00000478075 IQCF1Q8N6M8 205 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 ATRIPQ8WXE1 791 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 FKBP10Q96AY3 582 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 CAMK1GQ96NX5 476 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 CCDC113Q9H0I3 377 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 SAMD15Q9P1V8 674 aa2.37□□□□□ -2.03
CALD1-218ENST00000478075 B4GALT6Q9UBX8 382 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms