RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 POLD4Q9HCU8 107 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 ZMIZ1Q9ULJ6 1067 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 TPCN1Q9ULQ1 816 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 M0QZQ0 153 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 OAZ2O95190 189 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 PRAMEF12O95522 483 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 MUTP22033 750 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 PROZP22891 400 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 TNK2Q07912 1038 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 RNF43Q68DV7 783 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 GAREM2Q75VX8 874 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 GPIHBP1Q8IV16 184 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 KDF1Q8NAX2 398 aaPredicted RBP22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 PGLYRP2Q96PD5 576 aa22.11■■□□□ 1.13
PDLIM1-202ENST00000477757 FASNP49327 2511 aaKnown RBP22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 FGF19O95750 216 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 OR4Q2P0C623 313 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 MARCKSP29966 332 aaPredicted RBP22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 WEE1P30291 646 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 MCM7P33993 719 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 NOVA1P51513 510 aaKnown RBP22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 CACNB1Q02641 598 aaPredicted RBP22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 ITPRIPL2Q3MIP1 535 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TCEAL6Q6IPX3 200 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 MPZL3Q6UWV2 235 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TAS1R3Q7RTX0 852 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 BPIFB1Q8TDL5 484 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TCEAL3Q969E4 200 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TMEM209Q96SK2 561 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 EDEM2Q9BV94 578 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TARS2Q9BW92 718 aaKnown RBP22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 BHMT2Q9H2M3 363 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TMEM134Q9H6X4 195 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 ARHGAP28Q9P2N2 729 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 TUBGCP4Q9UGJ1 667 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 ASB3Q9Y575 518 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 EML5Q05BV3 1969 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 AKAP13Q12802 2813 aa22.1■■□□□ 1.13
PDLIM1-202ENST00000477757 OR6C75A6NL08 312 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 HOXB3P14651 431 aaPredicted RBP22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 ALDH1A3P47895 512 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 NPTX2P47972 431 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 DUSP4Q13115 394 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 GPR17Q13304 367 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 GPR158Q5T848 1215 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 HAUS3Q68CZ6 603 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 PSMG2Q969U7 264 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 TMEM121BQ9BXQ6 578 aaPredicted RBP22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 ATXN3LQ9H3M9 355 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 SLC8A2Q9UPR5 921 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 WASF3Q9UPY6 502 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 WDFY3Q8IZQ1 3526 aa22.09■■□□□ 1.13
PDLIM1-202ENST00000477757 CCDC169A6NNP5 214 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 ATG13O75143 517 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 AARSP49588 968 aaKnown RBP eCLIP22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 MCM2P49736 904 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 PEX3P56589 373 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 ACAP1Q15027 740 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 PLK5Q496M5 336 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 ARHGAP15Q53QZ3 475 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 TMEM196Q5HYL7 178 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 TCHPQ9BT92 498 aa22.08■■□□□ 1.13
PDLIM1-202ENST00000477757 GABRR2P28476 465 aa22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 ZNF252P-AS1Q0IIN9 211 aa22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 PTPAQ15257 358 aa22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 CENPPQ6IPU0 288 aa22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 FSTL4Q6MZW2 842 aa22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 DNAJB7Q7Z6W7 309 aaPredicted RBP22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 CAMKK1Q8N5S9 505 aa22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 TIMM13Q9Y5L4 95 aaPredicted RBP22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 DSPP15924 2871 aaKnown RBP22.07■■□□□ 1.12
PDLIM1-202ENST00000477757 MTMR11A4FU01 709 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 TMEM8BA6NDV4 472 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 OR52Z1P0C646 297 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 HARSP12081 509 aaKnown RBP22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 GRSF1Q12849 480 aaKnown RBP eCLIP22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 DMP1Q13316 513 aaPredicted RBP22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 ECM1Q16610 540 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 SLC10A6Q3KNW5 377 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 DAW1Q8N136 415 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 TTC9BQ8N6N2 239 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 DUSP15Q9H1R2 295 aaPredicted RBP22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 TASP1Q9H6P5 420 aa22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 THG1LQ9NWX6 298 aaKnown RBP22.06■■□□□ 1.12
PDLIM1-202ENST00000477757 GIPC1O14908 333 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 LRPAP1P30533 357 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 FOXC1Q12948 553 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 ORC2Q13416 577 aaPredicted RBP22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 MYBPC2Q14324 1141 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 NOLC1Q14978 699 aaKnown RBP eCLIP22.05■■□□□ 1.123e-6■□□□□ 10.3
PDLIM1-202ENST00000477757 ELF2Q15723 593 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 USP37Q86T82 979 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 ITIH5Q86UX2 942 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 ATAD1Q8NBU5 361 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 CHFRQ96EP1 664 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 ADAM33Q9BZ11 813 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 KMT5AQ9NQR1 393 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 HSFX1Q9UBD0 423 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 SLC27A5Q9Y2P5 690 aa22.05■■□□□ 1.12
PDLIM1-202ENST00000477757 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms