RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 FAM160A2Q8N612 972 aaPredicted RBP22.28■■□□□ 1.16
VPS36-203ENST00000475375 C4orf32Q8N8J7 132 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 BEST2Q8NFU1 509 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 KIF12Q96FN5 646 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 OXCT2Q9BYC2 517 aaPredicted RBP22.28■■□□□ 1.16
VPS36-203ENST00000475375 DNAJC25Q9H1X3 360 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 ATXN3LQ9H3M9 355 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 GTSE1Q9NYZ3 720 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 SLC27A5Q9Y2P5 690 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 MYBPHLA2RUH7 354 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 OR6C75A6NL08 312 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 PP2D1A8MPX8 630 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 CLDN3O15551 220 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 PAPSS2O95340 614 aaPredicted RBP22.27■■□□□ 1.16
VPS36-203ENST00000475375 VNN2O95498 520 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 SMTNP53814 917 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 ARHGAP29Q52LW3 1261 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 ARHGAP15Q53QZ3 475 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 GPR158Q5T848 1215 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 IGSF22Q8N9C0 903 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 DDX1Q92499 740 aaKnown RBP22.27■■□□□ 1.16
VPS36-203ENST00000475375 LRRC3Q9BY71 257 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 CRISPLD1Q9H336 500 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 C2orf42Q9NWW7 574 aa22.27■■□□□ 1.16
VPS36-203ENST00000475375 CLTAP09496 248 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 GPR17Q13304 367 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 WDR44Q5JSH3 913 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 C1orf186Q6ZWK4 172 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 BICD1Q96G01 975 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 PLEKHA5Q9HAU0 1116 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 RALGAPA1Q6GYQ0 2036 aa22.26■■□□□ 1.15
VPS36-203ENST00000475375 ZFHX4Q86UP3 3567 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 SOAT2O75908 522 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 FGF19O95750 216 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 GABRR2P28476 465 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 CDC25AP30304 524 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 PPP2R3AQ06190 1150 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 OVOS1Q6IE37 1185 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 DNAJB7Q7Z6W7 309 aaPredicted RBP22.25■■□□□ 1.15
VPS36-203ENST00000475375 C12orf50Q8NA57 414 aaPredicted RBP22.25■■□□□ 1.15
VPS36-203ENST00000475375 FAM184AQ8NB25 1140 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 ATAD1Q8NBU5 361 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 TIPINQ9BVW5 301 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 UBQLN1Q9UMX0 589 aaKnown RBP22.25■■□□□ 1.15
VPS36-203ENST00000475375 ASB3Q9Y575 518 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 PDCD11Q14690 1871 aaKnown RBP22.25■■□□□ 1.15
VPS36-203ENST00000475375 CFAP47Q6ZTR5 3102 aa22.25■■□□□ 1.15
VPS36-203ENST00000475375 AXIN1O15169 862 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 PLS3P13797 630 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 LRPAP1P30533 357 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 HOXC13P31276 330 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 MCL1Q07820 350 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 TNK2Q07912 1038 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 CCDC6Q16204 474 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 CENPPQ6IPU0 288 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 ARMCX5Q6P1M9 558 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 ZPBP2Q6X784 338 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 GAREM2Q75VX8 874 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 KCNK18Q7Z418 384 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 ITIH5Q86UX2 942 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 WDR5BQ86VZ2 330 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 TMEM161BQ8NDZ6 487 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 FBXO18Q8NFZ0 1043 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 SPIRE2Q8WWL2 714 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 PSMG2Q969U7 264 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 LRRC3BQ96PB8 259 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 NTPCRQ9BSD7 190 aaKnown RBP22.24■■□□□ 1.15
VPS36-203ENST00000475375 KCNG1Q9UIX4 513 aa22.24■■□□□ 1.15
VPS36-203ENST00000475375 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.24■■□□□ 1.15
VPS36-203ENST00000475375 MTMR11A4FU01 709 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 XPOTO43592 962 aaKnown RBP22.23■■□□□ 1.15
VPS36-203ENST00000475375 MAPTP10636 758 aaKnown RBP22.23■■□□□ 1.15
VPS36-203ENST00000475375 GUCY2CP25092 1073 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 GUCY2FP51841 1108 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 SF3A2Q15428 464 aaKnown RBP22.23■■□□□ 1.15
VPS36-203ENST00000475375 SYNPOQ8N3V7 929 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 TTC9BQ8N6N2 239 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 GCNAQ96QF7 691 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 MKNK1Q9BUB5 465 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 ARRDC1-AS1Q9H2J1 176 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 THG1LQ9NWX6 298 aaKnown RBP22.23■■□□□ 1.15
VPS36-203ENST00000475375 ANGPTL2Q9UKU9 493 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 LIMCH1Q9UPQ0 1083 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 PCDHB6Q9Y5E3 794 aa22.23■■□□□ 1.15
VPS36-203ENST00000475375 TTC26A0AVF1 554 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 EXTL3O43909 919 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 HOXA6P31267 233 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 TNFSF9P41273 254 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 PXNP49023 591 aaPredicted RBP22.22■■□□□ 1.15
VPS36-203ENST00000475375 AARSP49588 968 aaKnown RBP eCLIP22.22■■□□□ 1.15
VPS36-203ENST00000475375 CDR1P51861 262 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 CYP4F8P98187 520 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 PLCB2Q00722 1185 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 CCINQ13939 588 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 MYBPC2Q14324 1141 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 VEPH1Q14D04 833 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 ITPRIPL2Q3MIP1 535 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 DTHD1Q6ZMT9 781 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 BPIFB1Q8TDL5 484 aa22.22■■□□□ 1.15
VPS36-203ENST00000475375 FAM212AQ96EL1 285 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms