RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 UBQLN1Q9UMX0 589 aaKnown RBP12.55□□□□□ -0.4
EXOSC1-207ENST00000474309 YIPF1Q9Y548 306 aa12.55□□□□□ -0.4
EXOSC1-207ENST00000474309 ATG2BQ96BY7 2078 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 A0A1W2PRU2 124 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 H0YCG3 227 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 K7ESF4 209 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DPYSL4O14531 572 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 VNN2O95498 520 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 ADRB2P07550 413 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 ALDH1A3P47895 512 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 KPNA1P52294 538 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DUSP4Q13115 394 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 LPAL2Q16609 132 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DTHD1Q6ZMT9 781 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 PRR23BQ6ZRT6 265 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DNAJB7Q7Z6W7 309 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 USP37Q86T82 979 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 SYT2Q8N9I0 419 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DDX1Q92499 740 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 PSMG2Q969U7 264 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 MAP1BP46821 2468 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 NCANO14594 1321 aa12.54□□□□□ -0.4
EXOSC1-207ENST00000474309 CHURC1-FNTBB4DL54 471 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 SPECC1L-ADORA2AF8WAN1 911 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 KRT37O76014 449 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 HARSP12081 509 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 SCP2P22307 547 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 FNTBP49356 437 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 NBR1Q14596 966 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 SEZ6Q53EL9 994 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 DSTYKQ6XUX3 929 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 PRR23CQ6ZRP0 262 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 GAREM2Q75VX8 874 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 KCNK18Q7Z418 384 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 ITIH5Q86UX2 942 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 CD302Q8IX05 232 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 RSPRY1Q96DX4 576 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 MKNK1Q9BUB5 465 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 TIMM13Q9Y5L4 95 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-207ENST00000474309 KMT2BQ9UMN6 2715 aaPredicted RBP12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 CCDC163A0A0D9SF12 145 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 MTMR11A4FU01 709 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 LACTBL1A8MY62 500 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 CXCL8P10145 99 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 CDC25AP30304 524 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 CTHP32929 405 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 TUFMP49411 452 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 SMARCB1Q12824 385 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 CCINQ13939 588 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 PTPAQ15257 358 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 IL17AQ16552 155 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 ARHGAP15Q53QZ3 475 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 PPM1JQ5JR12 505 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 SPATA1Q5VX52 437 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 OVOS1Q6IE37 1185 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 FAM200AQ8TCP9 573 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 LOXL4Q96JB6 756 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 LRRC3BQ96PB8 259 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 PGLYRP2Q96PD5 576 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 ATXN3LQ9H3M9 355 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 TASP1Q9H6P5 420 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 RBM12Q9NTZ6 932 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 ANKFY1Q9P2R3 1169 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.41
EXOSC1-207ENST00000474309 NUP210Q8TEM1 1887 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 SLC38A8A6NNN8 435 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 PP2D1A8MPX8 630 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 PIGRP01833 764 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 CYP11A1P05108 521 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 SOX9P48436 509 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 LIMK1P53667 647 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 NCKAP1LP55160 1127 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 LILRA4P59901 499 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 DMWDQ09019 674 aa12.51□□□□□ -0.41
EXOSC1-207ENST00000474309 WDR44Q5JSH3 913 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms