RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 VWC2LB2RUY7 222 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCDHGA12O60330 932 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PRAMEF10O60809 474 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PARNO95453 639 aaKnown RBP4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 ITPKBP27987 946 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 MTNR1BP49286 362 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 EPHB1P54762 984 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCBP2Q15366 365 aaKnown RBP eCLIP4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 GJC2Q5T442 439 aaPredicted RBP4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 RASAL3Q86YV0 1011 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 HOOK2Q96ED9 719 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 FAXDC2Q96IV6 333 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 LRIG1Q96JA1 1093 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 C7orf25Q9BPX7 421 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 CTTNBP2NLQ9P2B4 639 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 SLC45A2Q9UMX9 530 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 SPEF1Q9Y4P9 236 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCDHGA9Q9Y5G4 932 aaKnown RBP4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCDHGA8Q9Y5G5 932 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCDHGA7Q9Y5G6 932 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCDHGA6Q9Y5G7 932 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 PCDHGA3Q9Y5H0 932 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
TMEM50B-208ENST00000474272 GRM6O15303 877 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 AKAP10O43572 662 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 HAUS5O94927 633 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 PPP3CBP16298 524 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 KCNA2P16389 499 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 WT1P19544 449 aaPredicted RBP4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 RAB27AP51159 221 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 SLC5A3P53794 718 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 RPS7P62081 194 aaKnown RBP4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 KRT85P78386 507 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 PIN1Q13526 163 aaPredicted RBP4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 TXNRD1Q16881 649 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 FLYWCH1Q4VC44 716 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 DACT2Q5SW24 774 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 PGM2L1Q6PCE3 622 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 C9orf106Q8NAJ2 232 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 HASPINQ8TF76 798 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 KLHL32Q96NJ5 620 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 HAPLN3Q96S86 360 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 RTFDC1Q9BY42 306 aaPredicted RBP4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 SLC13A1Q9BZW2 595 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 MANSC1Q9H8J5 431 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 MKS1Q9NXB0 559 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 PCDHA13Q9Y5I0 950 aa4.71□□□□□ -1.66
TMEM50B-208ENST00000474272 CCDC151A5D8V7 595 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 FAM171A2A8MVW0 826 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 PROM1O43490 865 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 ORC4O43929 436 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 SUN1O94901 812 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 ABLIM3O94929 683 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 PRKCGP05129 697 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 CTXN1P60606 82 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 TARDBPQ13148 414 aaKnown RBP eCLIP4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 DYRK1AQ13627 763 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 ODF1Q14990 250 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 LRRC41Q15345 812 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 NFE2Q16621 373 aaPredicted RBP4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 FCRLBQ6BAA4 426 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 PTF1AQ7RTS3 328 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 AMOTL1Q8IY63 956 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 ADGRG5Q8IZF4 528 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 PDPRQ8NCN5 879 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 TMX3Q96JJ7 454 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 IMPG2Q9BZV3 1241 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 ZNF277Q9NRM2 450 aaPredicted RBP4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 AASDHPPTQ9NRN7 309 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 GPR45Q9Y5Y3 372 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 WNT6Q9Y6F9 365 aa4.7□□□□□ -1.66
TMEM50B-208ENST00000474272 PROB1E7EW31 1015 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 TOR1BO14657 336 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 XPOTO43592 962 aaKnown RBP4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 SCGB1D2O95969 90 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 AGXTP21549 392 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 ZNF280AP59817 542 aaPredicted RBP4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 TFF2Q03403 129 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 ZNF844Q08AG5 666 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 PTPRRQ15256 657 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 CLUL1Q15846 466 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 PREPLQ4J6C6 727 aaPredicted RBP4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 ZNF782Q6ZMW2 699 aaPredicted RBP4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 VGLL2Q8N8G2 317 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 NLGN4YQ8NFZ3 816 aaPredicted RBP4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 JADE3Q92613 823 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 TEKT5Q96M29 485 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 RHOBTB2Q9BYZ6 727 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 CDH19Q9H159 772 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 ZIM2Q9NZV7 527 aa4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 LUC7L2Q9Y383 392 aaKnown RBP4.69□□□□□ -1.66
TMEM50B-208ENST00000474272 TP73O15350 636 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 MARCH6O60337 910 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 ZRANB2O95218 330 aaKnown RBP eCLIP4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 RHOP08100 348 aa4.68□□□□□ -1.66
TMEM50B-208ENST00000474272 EZH2Q15910 746 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms