RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PTP4A2Q12974 167 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 DAB2IPQ5VWQ8 1189 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 USP38Q8NB14 1042 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 PBKQ96KB5 322 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 AP1M1Q9BXS5 423 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 ELOVL4Q9GZR5 314 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 ARGLU1Q9NWB6 273 aaPredicted RBP19.18■□□□□ 0.66
VARS2-206ENST00000473916 ITGA11Q9UKX5 1188 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 CDY2AQ9Y6F7 541 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 GRIN2DO15399 1336 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 CES2O00748 559 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 KPNA6O60684 536 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 RAD23BP54727 409 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 ARRDC4Q8NCT1 418 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 SPC25Q9HBM1 224 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 CREBZFQ9NS37 354 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 ADAM22Q9P0K1 906 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 UVRAGQ9P2Y5 699 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 DMGDHQ9UI17 866 aaKnown RBP19.18■□□□□ 0.66
VARS2-206ENST00000473916 ANAPC7Q9UJX3 599 aa19.18■□□□□ 0.66
VARS2-206ENST00000473916 ZRANB2O95218 330 aaKnown RBP eCLIP19.17■□□□□ 0.66
VARS2-206ENST00000473916 TUBB4BP68371 445 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 MRPS6P82932 125 aaKnown RBP19.17■□□□□ 0.66
VARS2-206ENST00000473916 TAF2Q6P1X5 1199 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 TMCO3Q6UWJ1 677 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 ALKAL1Q6UXT8 129 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 TRIM72Q6ZMU5 477 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 MTERF4Q7Z6M4 381 aaKnown RBP19.17■□□□□ 0.66
VARS2-206ENST00000473916 GSPT2Q8IYD1 628 aaKnown RBP19.17■□□□□ 0.66
VARS2-206ENST00000473916 WDTC1Q8N5D0 677 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 RNF14Q9UBS8 474 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 SRRDQ9UH36 339 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 ITGA4P13612 1032 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 CD19P15391 556 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 RBP5P82980 135 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 ZBTB6Q15916 424 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 CCSAPQ6IQ19 270 aaPredicted RBP19.17■□□□□ 0.66
VARS2-206ENST00000473916 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 PHF13Q86YI8 300 aaPredicted RBP19.17■□□□□ 0.66
VARS2-206ENST00000473916 NME8Q8N427 588 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 SLC4A11Q8NBS3 891 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 SMG8Q8ND04 991 aaKnown RBP19.17■□□□□ 0.66
VARS2-206ENST00000473916 KLHDC9Q8NEP7 349 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 ACTRT1Q8TDG2 376 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 VRTNQ9H8Y1 702 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 PLEKHA5Q9HAU0 1116 aa19.17■□□□□ 0.66
VARS2-206ENST00000473916 CCDC151A5D8V7 595 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 CILPO75339 1184 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 CHRNA1P02708 482 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 MYBL2P10244 700 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 AXLP30530 894 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 ATICP31939 592 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 YARSP54577 528 aaKnown RBP19.16■□□□□ 0.66
VARS2-206ENST00000473916 NKX3-2P78367 333 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 PCBP1Q15365 356 aaKnown RBP eCLIP19.16■□□□□ 0.66
VARS2-206ENST00000473916 RASGEF1CQ8N431 466 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 CD101Q93033 1021 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 KRT12Q99456 494 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 AVENQ9NQS1 362 aaPredicted RBP19.16■□□□□ 0.66
VARS2-206ENST00000473916 CNTN3Q9P232 1028 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 PARP2Q9UGN5 583 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 TMEM59LQ9UK28 342 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 IPPQ9Y573 584 aa19.16■□□□□ 0.66
VARS2-206ENST00000473916 MEIS3P2A8K0S8 358 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 PGRMC1O00264 195 aaKnown RBP19.15■□□□□ 0.66
VARS2-206ENST00000473916 BRD3Q15059 726 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 APBB1IPQ7Z5R6 666 aaPredicted RBP19.15■□□□□ 0.66
VARS2-206ENST00000473916 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
VARS2-206ENST00000473916 SERINC5Q86VE9 423 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 CD302Q8IX05 232 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 KLHL7Q8IXQ5 586 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.15■□□□□ 0.667e-9■■■■■ 31.8
VARS2-206ENST00000473916 SELENOOQ9BVL4 669 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 GOLGA2P5Q9HBQ8 144 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 TJP2Q9UDY2 1190 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 CYTH4Q9UIA0 394 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 NR2E1Q9Y466 385 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 SPDYE4A6NLX3 237 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 SPOPO43791 374 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 SASH3O75995 380 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 MMP8P22894 467 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 MAMLD1Q13495 774 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 TWF2Q6IBS0 349 aaKnown RBP19.15■□□□□ 0.66
VARS2-206ENST00000473916 WDR93Q6P2C0 686 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 RNPC3Q96LT9 517 aaKnown RBP19.15■□□□□ 0.66
VARS2-206ENST00000473916 TRPV2Q9Y5S1 764 aa19.15■□□□□ 0.66
VARS2-206ENST00000473916 SMIM28A0A1B0GU29 152 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 ZSCAN5CA6NGD5 496 aaPredicted RBP19.14■□□□□ 0.65
VARS2-206ENST00000473916 FGGP02679 453 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 MYBL1P10243 752 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 PEX5P50542 639 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 APLP1P51693 650 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 YWHAEP62258 255 aaKnown RBP19.14■□□□□ 0.65
VARS2-206ENST00000473916 TNNC1P63316 161 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 SOX4Q06945 474 aaPredicted RBP19.14■□□□□ 0.65
VARS2-206ENST00000473916 LONRF2Q1L5Z9 754 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 CYP4A22Q5TCH4 519 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 NT5DC4Q86YG4 428 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
VARS2-206ENST00000473916 SENP6Q9GZR1 1112 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms