RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 USP20Q9Y2K6 914 aa15.23■□□□□ 0.03
SMURF1-203ENST00000472627 IGF2RP11717 2491 aa15.23■□□□□ 0.03
SMURF1-203ENST00000472627 LNP1A1A4G5 178 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 BCLAF3A2AJT9 711 aaKnown RBP15.22■□□□□ 0.03
SMURF1-203ENST00000472627 OR6C75A6NL08 312 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 GIPC1O14908 333 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 REC8O95072 547 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 APBB3O95704 486 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 SPINK2P20155 84 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 DRD1P21728 446 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 GABRR2P28476 465 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 WEE1P30291 646 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 RING1Q06587 406 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 TOB2Q14106 344 aaPredicted RBP15.22■□□□□ 0.03
SMURF1-203ENST00000472627 TMEM196Q5HYL7 178 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 NT5DC1Q5TFE4 455 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 ALKAL1Q6UXT8 129 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 BEST2Q8NFU1 509 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 OXER1Q8TDS5 423 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 GATA6Q92908 595 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 PSMG2Q969U7 264 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 PGLYRP2Q96PD5 576 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 MRPL4Q9BYD3 311 aaKnown RBP15.22■□□□□ 0.03
SMURF1-203ENST00000472627 DUSP15Q9H1R2 295 aaPredicted RBP15.22■□□□□ 0.03
SMURF1-203ENST00000472627 TASP1Q9H6P5 420 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 CNTN3Q9P232 1028 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 NEUROG3Q9Y4Z2 214 aa15.22■□□□□ 0.03
SMURF1-203ENST00000472627 A0A087WWV3 80 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 RNF40O75150 1001 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 MCF2P10911 925 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 CDC25CP30307 473 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 TNK2Q07912 1038 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 DUSP4Q13115 394 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 GPR17Q13304 367 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 TAF12Q16514 161 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 STXBP5Q5T5C0 1151 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 CC2D1AQ6P1N0 951 aaPredicted RBP15.21■□□□□ 0.03
SMURF1-203ENST00000472627 CATSPER3Q86XQ3 398 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 HHIPQ96QV1 700 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 POLR3CQ9BUI4 534 aaPredicted RBP15.21■□□□□ 0.03
SMURF1-203ENST00000472627 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 TMEM121BQ9BXQ6 578 aaPredicted RBP15.21■□□□□ 0.03
SMURF1-203ENST00000472627 LRRC3Q9BY71 257 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 CDT1Q9H211 546 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 WASF3Q9UPY6 502 aa15.21■□□□□ 0.03
SMURF1-203ENST00000472627 TRDMT1O14717 391 aaKnown RBP15.2■□□□□ 0.02
SMURF1-203ENST00000472627 OAZ2O95190 189 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 EDN1P05305 212 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 SPATA31C1P0DKV0 1188 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 LMAN2Q12907 356 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 RUNX3Q13761 415 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 USP39Q53GS9 565 aaKnown RBP15.2■□□□□ 0.02
SMURF1-203ENST00000472627 HAUS3Q68CZ6 603 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 ARMCX5Q6P1M9 558 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 SYT13Q7L8C5 426 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 CYP2U1Q7Z449 544 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
SMURF1-203ENST00000472627 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 CEP120Q8N960 986 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 ZMAT2Q96NC0 199 aaKnown RBP15.2■□□□□ 0.02
SMURF1-203ENST00000472627 ZSWIM6Q9HCJ5 1215 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 HSFX1Q9UBD0 423 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 EBF1Q9UH73 591 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 ZZEF1O43149 2961 aa15.2■□□□□ 0.02
SMURF1-203ENST00000472627 SPEGQ15772 3267 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 NUP210Q8TEM1 1887 aaPredicted RBP15.19■□□□□ 0.02
SMURF1-203ENST00000472627 CCDC169A6NNP5 214 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 MUTP22033 750 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 AVPR1AP37288 418 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 TUFMP49411 452 aaKnown RBP15.19■□□□□ 0.02
SMURF1-203ENST00000472627 BFSP1Q12934 665 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 NR5A1Q13285 461 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
SMURF1-203ENST00000472627 MYBPC2Q14324 1141 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 UAP1L1Q3KQV9 507 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 FSTL4Q6MZW2 842 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 PKN3Q6P5Z2 889 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
SMURF1-203ENST00000472627 LRRC3BQ96PB8 259 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 MTMR9Q96QG7 549 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 ACO2Q99798 780 aaKnown RBP15.19■□□□□ 0.02
SMURF1-203ENST00000472627 DNAJC25Q9H1X3 360 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 GKN1Q9NS71 199 aa15.19■□□□□ 0.02
SMURF1-203ENST00000472627 H0Y626 953 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 M0QZQ0 153 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 XPOTO43592 962 aaKnown RBP15.18■□□□□ 0.02
SMURF1-203ENST00000472627 MED24O75448 989 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 TRIM16O95361 564 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 PRAMEF12O95522 483 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 RPA1P27694 616 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 HOXC13P31276 330 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
SMURF1-203ENST00000472627 TRIM29Q14134 588 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 EARS2Q5JPH6 523 aaKnown RBP15.18■□□□□ 0.02
SMURF1-203ENST00000472627 CENPPQ6IPU0 288 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 DSTYKQ6XUX3 929 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 P2RY13Q9BPV8 354 aa15.18■□□□□ 0.02
SMURF1-203ENST00000472627 MKNK1Q9BUB5 465 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms