RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 PIBF1Q8WXW3 757 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 TEX13BQ9BXU2 312 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 KRTAP9-9Q9BYP9 154 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 KRTAP9-4Q9BYQ2 154 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 CD244Q9BZW8 370 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 C11orf49Q9H6J7 331 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 PDGFCQ9NRA1 345 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 CATSPERZQ9NTU4 200 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 RNF146Q9NTX7 359 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 DDX20Q9UHI6 824 aaKnown RBP7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 DSEQ9UL01 958 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 TELO2Q9Y4R8 837 aa7.8□□□□□ -1.16
PTP4A1-202ENST00000470661 ASTN1O14525 1302 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 MCM3APO60318 1980 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 MYADML2A6NDP7 307 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 SLC25A27O95847 323 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 LRG1P02750 347 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 CYP21A2P08686 494 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 PDHBP11177 359 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 ADCYAP1R1P41586 468 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 NOVP48745 357 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 STAT2P52630 851 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 ITGA1P56199 1179 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 NKX3-2P78367 333 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 SLC35G1Q2M3R5 365 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 SYDE2Q5VT97 1194 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 TEPPQ6URK8 271 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 ZC3H7AQ8IWR0 971 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 ENAHQ8N8S7 591 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 LINC01356Q8N9X3 169 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 SH3RF2Q8TEC5 729 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 CHURC1Q8WUH1 139 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 FBXW5Q969U6 566 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 SCLYQ96I15 445 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 C11orf84Q9BUA3 381 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 NCOA5Q9HCD5 579 aaKnown RBP7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 SPATA6Q9NWH7 488 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 ZHX1Q9UKY1 873 aaPredicted RBP7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 CBLCQ9ULV8 474 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 ALPK3Q96L96 1907 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 PLIN4Q96Q06 1357 aa7.79□□□□□ -1.16
PTP4A1-202ENST00000470661 A0A0G2JMZ2 1700 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 KRT15P19012 456 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 DNM2P50570 870 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 ZNF543Q08ER8 600 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 BAATQ14032 418 aaPredicted RBP7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 IMMTQ16891 758 aaKnown RBP7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 USH1GQ495M9 461 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 TRIM61Q5EBN2 209 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 FGD2Q7Z6J4 655 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 TRIM48Q8IWZ4 208 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 ESR2Q92731 530 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 MRPL4Q9BYD3 311 aaKnown RBP7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 LRRC2Q9BYS8 371 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 A1CFQ9NQ94 594 aaKnown RBP7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 TCP11L1Q9NUJ3 509 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 CCPG1Q9ULG6 757 aa7.78□□□□□ -1.16
PTP4A1-202ENST00000470661 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ESYT3A0FGR9 886 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 HIP1O00291 1037 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 WNT9AO14904 365 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 PPP1R12AO14974 1030 aaPredicted RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 SEPT4O43236 478 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 EFCAB14O75071 495 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 COL6A1P12109 1028 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 CALML3P27482 149 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ANTXR2P58335 489 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 BEX3Q00994 111 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 LRRC41Q15345 812 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 TMC5Q6UXY8 1006 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 SLC30A10Q6XR72 485 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 LIPIQ6XZB0 460 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ARHGAP36Q6ZRI8 547 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ARMCX2Q7L311 632 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 FAM160B2Q86V87 743 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 OSTM1Q86WC4 334 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 PTRH1Q86Y79 214 aaKnown RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ABRAQ8N0Z2 381 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 CISD2Q8N5K1 135 aaKnown RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 RNPC3Q96LT9 517 aaKnown RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 MAGEB10Q96LZ2 347 aaPredicted RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 TCEANC2Q96MN5 208 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ZSWIM3Q96MP5 696 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 MYL10Q9BUA6 226 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 HTATIP2Q9BUP3 242 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 LSG1Q9H089 658 aaKnown RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 RANBP17Q9H2T7 1088 aaKnown RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 WASF3Q9UPY6 502 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 ATP11BQ9Y2G3 1177 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 COQ6Q9Y2Z9 468 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 RBM8AQ9Y5S9 174 aaKnown RBP7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 PLXNA1Q9UIW2 1896 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 TNKSO95271 1327 aa7.77□□□□□ -1.17
PTP4A1-202ENST00000470661 hCG_1642624A0A1W2PR95 340 aa7.76□□□□□ -1.17
PTP4A1-202ENST00000470661 PTPDC1A2A3K4 754 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms