RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 ITIH6Q6UXX5 1313 aa13.03□□□□□ -0.32
CTNS-205ENST00000467663 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 HNRNPDLO14979 420 aaKnown RBP13.02□□□□□ -0.33
CTNS-205ENST00000467663 AP5Z1O43299 807 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 TGM5O43548 720 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 STX10O60499 249 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 EXOC3O60645 756 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 KCNE1P15382 129 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.33
CTNS-205ENST00000467663 LIG4P49917 911 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 OSTNP61366 133 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 KCNA1Q09470 495 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 UPP1Q16831 310 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 VWA3BQ502W6 1294 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
CTNS-205ENST00000467663 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 HFE2Q6ZVN8 426 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 TRIM59Q8IWR1 403 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 DRC7Q8IY82 874 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 LNX1Q8TBB1 728 aaPredicted RBP13.02□□□□□ -0.33
CTNS-205ENST00000467663 BICD1Q96G01 975 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 ZBTB45Q96K62 511 aaPredicted RBP13.02□□□□□ -0.33
CTNS-205ENST00000467663 SNX27Q96L92 541 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 NUP58Q9BVL2 599 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 SLC38A7Q9NVC3 462 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 CNTN3Q9P232 1028 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 DAAM1Q9Y4D1 1078 aa13.02□□□□□ -0.33
CTNS-205ENST00000467663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTNS-205ENST00000467663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTNS-205ENST00000467663 CCDC195A0A1B0GUA6 201 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 GTPBP10A4D1E9 387 aaKnown RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 M0R296 226 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 MEFVO15553 781 aaPredicted RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 B3GAT3O94766 335 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 TPM1P09493 284 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 SPATA31D3P0C874 917 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 KRT13P13646 458 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 RPL17P18621 184 aaKnown RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 FGFR3P22607 806 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 IGFBP6P24592 240 aaPredicted RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 CLCNKBP51801 687 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 SOX4Q06945 474 aaPredicted RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 MCL1Q07820 350 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 SIGLEC14Q08ET2 396 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 SPATA31D4Q6ZUB0 917 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 CEP57Q86XR8 500 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 VSTM4Q8IW00 320 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 FAM186BQ8IYM0 893 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 MFSD14AQ96MC6 490 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 ZMAT2Q96NC0 199 aaKnown RBP13.01□□□□□ -0.33
CTNS-205ENST00000467663 ERGIC2Q96RQ1 377 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 NDST4Q9H3R1 872 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 ZDHHC7Q9NXF8 308 aa13.01□□□□□ -0.33
CTNS-205ENST00000467663 TECTAO75443 2155 aa13□□□□□ -0.33
CTNS-205ENST00000467663 CLIC2O15247 247 aa13□□□□□ -0.33
CTNS-205ENST00000467663 PMM2O15305 246 aa13□□□□□ -0.33
CTNS-205ENST00000467663 P4HA2O15460 535 aa13□□□□□ -0.33
CTNS-205ENST00000467663 CLDN3O15551 220 aa13□□□□□ -0.33
CTNS-205ENST00000467663 TRAPPC3O43617 180 aa13□□□□□ -0.33
CTNS-205ENST00000467663 NRDCO43847 1150 aa13□□□□□ -0.33
CTNS-205ENST00000467663 N4BP1O75113 896 aaKnown RBP13□□□□□ -0.33
CTNS-205ENST00000467663 RFPL2O75678 378 aa13□□□□□ -0.33
CTNS-205ENST00000467663 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
CTNS-205ENST00000467663 SURF1Q15526 300 aa13□□□□□ -0.33
CTNS-205ENST00000467663 PSMD5Q16401 504 aa13□□□□□ -0.33
CTNS-205ENST00000467663 SLC10A6Q3KNW5 377 aa13□□□□□ -0.33
CTNS-205ENST00000467663 CCDC149Q6ZUS6 474 aa13□□□□□ -0.33
CTNS-205ENST00000467663 OTOP3Q7RTS5 596 aa13□□□□□ -0.33
CTNS-205ENST00000467663 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
CTNS-205ENST00000467663 GLYCTKQ8IVS8 523 aa13□□□□□ -0.33
CTNS-205ENST00000467663 GPD1LQ8N335 351 aa13□□□□□ -0.33
CTNS-205ENST00000467663 KREMEN2Q8NCW0 462 aa13□□□□□ -0.33
CTNS-205ENST00000467663 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
CTNS-205ENST00000467663 TMC2Q8TDI7 906 aa13□□□□□ -0.33
CTNS-205ENST00000467663 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
CTNS-205ENST00000467663 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
CTNS-205ENST00000467663 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
CTNS-205ENST00000467663 ASIC4Q96FT7 647 aa13□□□□□ -0.33
CTNS-205ENST00000467663 NAP1L5Q96NT1 182 aaPredicted RBP13□□□□□ -0.33
CTNS-205ENST00000467663 HAPLN2Q9GZV7 340 aa13□□□□□ -0.33
CTNS-205ENST00000467663 VPS16Q9H269 839 aa13□□□□□ -0.33
CTNS-205ENST00000467663 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
CTNS-205ENST00000467663 TAB2Q9NYJ8 693 aa13□□□□□ -0.33
CTNS-205ENST00000467663 HSPBP1Q9NZL4 362 aa13□□□□□ -0.33
CTNS-205ENST00000467663 ANKFY1Q9P2R3 1169 aa13□□□□□ -0.33
CTNS-205ENST00000467663 SORCS3Q9UPU3 1222 aa13□□□□□ -0.33
CTNS-205ENST00000467663 ZNF233A6NK53 670 aa12.99□□□□□ -0.33
CTNS-205ENST00000467663 EXTL3O43909 919 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms