RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 YIPF1Q9Y548 306 aa6.23□□□□□ -1.41
CXXC4-202ENST00000466963 PRUNE2Q8WUY3 3088 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 KLF18A0A0U1RQI7 1052 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 PODXLO00592 558 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 PTGESO14684 152 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 KIAA0391O15091 583 aaKnown RBP6.22□□□□□ -1.41
CXXC4-202ENST00000466963 RECQL4O94761 1208 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 NOL4O94818 638 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 CSPG5O95196 566 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 SRGAP2CP0DJJ0 459 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 SFTPCP11686 197 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 MAGEA11P43364 429 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 PTH1RQ03431 593 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 SCRN1Q12765 414 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 ORC1Q13415 861 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 COL9A3Q14050 684 aaPredicted RBP6.22□□□□□ -1.41
CXXC4-202ENST00000466963 ANKRD1Q15327 319 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 EMC10Q5UCC4 262 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 TMPRSS7Q7RTY8 843 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 KBTBD6Q86V97 674 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 CADM4Q8NFZ8 388 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 MRPS31Q92665 395 aaKnown RBP6.22□□□□□ -1.41
CXXC4-202ENST00000466963 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 NTPCRQ9BSD7 190 aaKnown RBP6.22□□□□□ -1.41
CXXC4-202ENST00000466963 PLA2G2FQ9BZM2 168 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 EVA1BQ9NVM1 165 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 FLRT2O43155 660 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 B4GALT3O60512 393 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 MOSPD3O75425 235 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 B3GAT3O94766 335 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 CLTAP09496 248 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 GLRA2P23416 452 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 RARRES1P49788 294 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 RING1Q06587 406 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 BMP2KLQ5H9B9 411 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 SMYD5Q6GMV2 418 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 TYW1BQ6NUM6 668 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 TMEM86AQ8N2M4 240 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 DDX12PQ92771 950 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 NXPE2Q96DL1 559 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 DNAI2Q9GZS0 605 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 PCDHB9Q9Y5E1 797 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 TSC2P49815 1807 aa6.22□□□□□ -1.41
CXXC4-202ENST00000466963 PROZP22891 400 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 P2RY2P41231 377 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 ATXN3P54252 364 aaPredicted RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 YWHAHQ04917 246 aaPredicted RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 FOXC1Q12948 553 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 SERINC3Q13530 473 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 SOWAHCQ53LP3 525 aaPredicted RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 ATF7IP2Q5U623 682 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 LYSMD4Q5XG99 296 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 PRSS55Q6UWB4 352 aaPredicted RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 OXR1Q8N573 874 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 OSCP1Q8WVF1 389 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 ZFP91Q96JP5 570 aaPredicted RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 EIF2AQ9BY44 585 aaKnown RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 POLR3FQ9H1D9 316 aaPredicted RBP6.21□□□□□ -1.41
CXXC4-202ENST00000466963 MIOSQ9NXC5 875 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 NUB1Q9Y5A7 615 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 CACNA1BQ00975 2339 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 LAMA3Q16787 3333 aa6.21□□□□□ -1.41
CXXC4-202ENST00000466963 MYMKA6NI61 221 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 C4orf47A7E2U8 309 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 PIGRP01833 764 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 IFNAR2P48551 515 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 FAM160A1Q05DH4 1040 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 PDIA5Q14554 519 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 DMC1Q14565 340 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 PKDCCQ504Y2 493 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 MPZL3Q6UWV2 235 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 DBX2Q6ZNG2 339 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 TMPRSS12Q86WS5 348 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 ZNF557Q8N988 423 aaPredicted RBP6.21□□□□□ -1.42
CXXC4-202ENST00000466963 KRI1Q8N9T8 703 aaKnown RBP6.21□□□□□ -1.42
CXXC4-202ENST00000466963 PDZD8Q8NEN9 1154 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 OXER1Q8TDS5 423 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 MTMR9Q96QG7 549 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 RPP25Q9BUL9 199 aaKnown RBP6.21□□□□□ -1.42
CXXC4-202ENST00000466963 SCNM1Q9BWG6 230 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 ASB7Q9H672 318 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 CAPN10Q9HC96 672 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 XPNPEP1Q9NQW7 623 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 CDH22Q9UJ99 828 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 POLIQ9UNA4 740 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 RPA1P27694 616 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 TWF1Q12792 350 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 PSMD2Q13200 908 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 NTRK3Q16288 839 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 FSTL4Q6MZW2 842 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 KANK3Q6NY19 840 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 BLOC1S2Q6QNY1 142 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 IGF2-ASQ6U949 168 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 DPH6Q7L8W6 267 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 CMTM8Q8IZV2 173 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 SKA1Q96BD8 255 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 SPATA17Q96L03 361 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 ZNF560Q96MR9 790 aa6.21□□□□□ -1.42
CXXC4-202ENST00000466963 SENP2Q9HC62 589 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms