RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 C4BPAP04003 597 aaKnown RBP14.74□□□□□ -0.05
LIMD1-203ENST00000465039 KRT19P08727 400 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 HOXA9P31269 272 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 CA8P35219 290 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 LTBRP36941 435 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 ITIH3Q06033 890 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 TRPC3Q13507 836 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 SKOR2Q2VWA4 1001 aaPredicted RBP14.74□□□□□ -0.05
LIMD1-203ENST00000465039 SMYD5Q6GMV2 418 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 OVOS1Q6IE37 1185 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 KLHL10Q6JEL2 608 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 LILRA6Q6PI73 481 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 SV2AQ7L0J3 742 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 RBM23Q86U06 439 aaKnown RBP14.74□□□□□ -0.05
LIMD1-203ENST00000465039 SMRP1Q8NCR6 262 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 B3GALT6Q96L58 329 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 IMPG2Q9BZV3 1241 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 XYLT2Q9H1B5 865 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 SFXN1Q9H9B4 322 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 ZDHHC7Q9NXF8 308 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 FBXW11Q9UKB1 542 aa14.74□□□□□ -0.05
LIMD1-203ENST00000465039 NCOR1O75376 2440 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 I3L4J1 428 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 CYB561D2O14569 222 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 PER2O15055 1255 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 N4BP1O75113 896 aaKnown RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 PHACTR2O75167 634 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 LETM1O95202 739 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 P4HA1P13674 534 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 IGFBP6P24592 240 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 MRPS5P82675 430 aaKnown RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 SMAD4Q13485 552 aaKnown RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 BIRC3Q13489 604 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 NCOA4Q13772 614 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 SGSM1Q2NKQ1 1148 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 UVSSAQ2YD98 709 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 DPCR1Q3MIW9 517 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 CTXN3Q4LDR2 81 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 C1orf220Q5T0J3 134 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 TDRD10Q5VZ19 366 aaKnown RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 KRT39Q6A163 491 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 ISM2Q6H9L7 571 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 ANKRD54Q6NXT1 300 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 PRSS55Q6UWB4 352 aaPredicted RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 THEM5Q8N1Q8 247 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 VN1R2Q8NFZ6 395 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 C2orf15Q8WU43 125 aaKnown RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 PPM1EQ8WY54 764 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 ZNF516Q92618 1163 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 POP1Q99575 1024 aaKnown RBP14.73□□□□□ -0.05
LIMD1-203ENST00000465039 ANO10Q9NW15 660 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 CLEC1BQ9P126 229 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 CD207Q9UJ71 328 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 FBXL5Q9UKA1 691 aa14.73□□□□□ -0.05
LIMD1-203ENST00000465039 MTCL1Q9Y4B5 1905 aaKnown RBP14.72□□□□□ -0.05
LIMD1-203ENST00000465039 GABRDO14764 452 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 P4HA2O15460 535 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 TGM5O43548 720 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 TACC1O75410 805 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 ABLIM3O94929 683 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 CSPG5O95196 566 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
LIMD1-203ENST00000465039 HNRNPA1P09651 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
LIMD1-203ENST00000465039 CCDC192P0DO97 292 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 KCNA5P22460 613 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 PCSK1P29120 753 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 OR1D2P34982 312 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 LHX1P48742 406 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 MXI1P50539 228 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 DLG4P78352 724 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 ROR1Q01973 937 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 STX1AQ16623 288 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 LMBRD2Q68DH5 695 aaPredicted RBP14.72□□□□□ -0.05
LIMD1-203ENST00000465039 SASS6Q6UVJ0 657 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 CCDC149Q6ZUS6 474 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 FAM114A1Q8IWE2 563 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.72□□□□□ -0.05
LIMD1-203ENST00000465039 SLC35C1Q96A29 364 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 NECTIN4Q96NY8 510 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 IGFLR1Q9H665 355 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 AFF4Q9UHB7 1163 aaKnown RBP14.72□□□□□ -0.05
LIMD1-203ENST00000465039 COQ4Q9Y3A0 265 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 CDY1Q9Y6F8 540 aa14.72□□□□□ -0.05
LIMD1-203ENST00000465039 LINC01565O15544 149 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 ATF2P15336 505 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 GTF2F1P35269 517 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIMD1-203ENST00000465039 TNNC1P63316 161 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 PPP3CAQ08209 521 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 GPR17Q13304 367 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 ZNF699Q32M78 642 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 CCDC40Q4G0X9 1142 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 TRIM59Q8IWR1 403 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 TCEAL8Q8IYN2 117 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 PDCL2Q8N4E4 241 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 TTC39CQ8N584 583 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 CCDC150Q8NCX0 1101 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 FBXL13Q8NEE6 735 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 ASB2Q96Q27 587 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms