RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 HERVK_113P62684 666 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 ICA1Q05084 483 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 ST3GAL1Q11201 340 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 TRDNQ13061 729 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 MLC1Q15049 377 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 PDCD1Q15116 288 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 C4orf46Q504U0 113 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 CATSPEREQ5SY80 951 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 CPZQ66K79 652 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 TATDN1Q6P1N9 297 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 NFXL1Q6ZNB6 911 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 RUFY3Q7L099 469 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 C14orf80Q86SX3 495 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 CMTR2Q8IYT2 770 aaKnown RBP5.63□□□□□ -1.51
SF3A3-202ENST00000460925 ZNF444Q8N0Y2 327 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-202ENST00000460925 LILRA2Q8N149 483 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.63□□□□□ -1.51
SF3A3-202ENST00000460925 ESR2Q92731 530 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 SHISA4Q96DD7 197 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 ZNF341Q9BYN7 854 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 RNF41Q9H4P4 317 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-202ENST00000460925 LY9Q9HBG7 655 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 GBA2Q9HCG7 927 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-202ENST00000460925 PDRG1Q9NUG6 133 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 C19orf73Q9NVV2 129 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 CCDC39Q9UFE4 941 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 SWAP70Q9UH65 585 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 IP6K2Q9UHH9 426 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 HERC5Q9UII4 1024 aaKnown RBP5.63□□□□□ -1.51
SF3A3-202ENST00000460925 CYP46A1Q9Y6A2 500 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 COMMD10Q9Y6G5 202 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 RLFQ13129 1914 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 PASKQ96RG2 1323 aa5.63□□□□□ -1.51
SF3A3-202ENST00000460925 ZSWIM8A7E2V4 1837 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 KLF18A0A0U1RQI7 1052 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 GOLGA8BA8MQT2 603 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 HMGB1P1B2RPK0 211 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA12O60330 932 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 KIF20AO95235 890 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 EEF2P13639 858 aaKnown RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PNLIPP16233 465 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 TACR1P25103 407 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 MCM5P33992 734 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 NF2P35240 595 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 CYP4F8P98187 520 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 GRM1Q13255 1194 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 TUSC3Q13454 348 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 KRT32Q14532 448 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 WTAPQ15007 396 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 GFOD2Q3B7J2 385 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 SUPT20HL1Q3ZLR7 823 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 BTBD8Q5XKL5 378 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PGM2L1Q6PCE3 622 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 ZNF574Q6ZN55 896 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 MICU3Q86XE3 530 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 SIAH1Q8IUQ4 282 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 FOXP4Q8IVH2 680 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 SCYL3Q8IZE3 742 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 SPICE1Q8N0Z3 855 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 NECAB1Q8N987 351 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 IGDCC4Q8TDY8 1250 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 IL17RAQ96F46 866 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 FAM210AQ96ND0 272 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 SENP7Q9BQF6 1050 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 UBAC1Q9BSL1 405 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 KRT23Q9C075 422 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 AP5M1Q9H0R1 490 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 WNT8AQ9H1J5 351 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 CPVLQ9H3G5 476 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 MKS1Q9NXB0 559 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 HSPBP1Q9NZL4 362 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 CLIP2Q9UDT6 1046 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PUF60Q9UHX1 559 aaKnown RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 ZNF112Q9UJU3 913 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 ISY1Q9ULR0 285 aaKnown RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 STX8Q9UNK0 236 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHB4Q9Y5E5 795 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA9Q9Y5G4 932 aaKnown RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA8Q9Y5G5 932 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA7Q9Y5G6 932 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA6Q9Y5G7 932 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA3Q9Y5H0 932 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 PCDHGA2Q9Y5H1 932 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 MRFAP1Q9Y605 127 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 FRMPD2Q68DX3 1309 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-202ENST00000460925 CEP350Q5VT06 3117 aa5.62□□□□□ -1.51
SF3A3-202ENST00000460925 hCG_1642624A0A1W2PR95 340 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TCRBV5S2A0A599 114 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 GOLGA8AA7E2F4 631 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PRPF3O43395 683 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PEX10O60683 326 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 EIF3JO75822 258 aaKnown RBP5.61□□□□□ -1.51
SF3A3-202ENST00000460925 TOMM70O94826 608 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PLEKHA8P1O95397 391 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CYBBP04839 570 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 GOLGA8HP0CJ92 632 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 PSMA5P28066 241 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CD151P48509 253 aa5.61□□□□□ -1.51
SF3A3-202ENST00000460925 CD97P48960 835 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms