RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 SLC9A1P19634 815 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 CDC25BP30305 580 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 ZNF75DP51815 510 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 SMARCB1Q12824 385 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.29
HDAC4-206ENST00000460235 PTPROQ16827 1216 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 TIGD5Q53EQ6 642 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 FAM171A1Q5VUB5 890 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 ELMSAN1Q6PJG2 1045 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 FBXO22Q8NEZ5 403 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 LMO3Q8TAP4 145 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 CXorf38Q8TB03 319 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 SEMA4DQ92854 862 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 STK33Q9BYT3 514 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 CXCL16Q9H2A7 254 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.29
HDAC4-206ENST00000460235 MRPL17Q9NRX2 175 aaKnown RBP13.21□□□□□ -0.29
HDAC4-206ENST00000460235 FAM207AQ9NSI2 230 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-206ENST00000460235 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
HDAC4-206ENST00000460235 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
HDAC4-206ENST00000460235 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
HDAC4-206ENST00000460235 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.3
HDAC4-206ENST00000460235 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 OR6C75A6NL08 312 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 TEX33O43247 280 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 NRDCO43847 1150 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 WARSP23381 471 aaKnown RBP13.2□□□□□ -0.3
HDAC4-206ENST00000460235 DNAJB2P25686 324 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 GNL1P36915 607 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-206ENST00000460235 STAT1P42224 750 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 GLUD2P49448 558 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 TSPY1Q01534 308 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 LRMPQ12912 555 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 OVOS1Q6IE37 1185 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 CEP57Q86XR8 500 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 VSTM4Q8IW00 320 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 ADGRF2Q8IZF7 708 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 HERC2P3Q9BVR0 1158 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 BCO2Q9BYV7 579 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 IMPACTQ9P2X3 320 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 BARX2Q9UMQ3 279 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-206ENST00000460235 ANK1P16157 1881 aa13.2□□□□□ -0.3
HDAC4-206ENST00000460235 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
HDAC4-206ENST00000460235 NT5C1B-RDH14C9J2C7 533 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 OAZ2O95190 189 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 ADCY5O95622 1261 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 FGFR3P22607 806 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
HDAC4-206ENST00000460235 TAP1Q03518 808 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 PTK2Q05397 1052 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 STILQ15468 1287 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 CNGA4Q8IV77 575 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 DCP1BQ8IZD4 617 aaKnown RBP13.19□□□□□ -0.3
HDAC4-206ENST00000460235 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 KLHL23Q8NBE8 558 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 OR6B3Q8NGW1 331 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 NT5C1AQ9BXI3 368 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 EMILIN2Q9BXX0 1053 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 MARCH5Q9NX47 278 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 PCDHB4Q9Y5E5 795 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 BZW2Q9Y6E2 419 aaKnown RBP13.19□□□□□ -0.3
HDAC4-206ENST00000460235 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
HDAC4-206ENST00000460235 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 A8MXQ7 604 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 H3BNC9 293 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 MED7O43513 233 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 C1RP00736 705 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 PAEPP09466 180 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 KRT5P13647 590 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 ASPAP45381 313 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 BRCC3P46736 316 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 SLC8A3P57103 927 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 ZBED6P86452 979 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 DSG1Q02413 1049 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 INCA1Q0VD86 236 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 GPM6BQ13491 265 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
HDAC4-206ENST00000460235 NFE2Q16621 373 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-206ENST00000460235 SOWAHAQ2M3V2 549 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 TMC7Q7Z402 723 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 PDCL2Q8N4E4 241 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
HDAC4-206ENST00000460235 MICAL1Q8TDZ2 1067 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms